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Detailed information on CNT30712674


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 6e-46

BLAST vs NONCODE:
NONCQUT001608, E-value = 1e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020258Glycine maxCitrullus lanatus33.2829.1883.98206forward
CNT30620782Glycine maxCajanus cajan44.4325.7288.73275forward

Expression of CNT30712674

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MEVMSLLVFLVGKPAMDLRPVNGATMPAPARLTVVTAGEEIIEEAICFSFLVLNYLFFCCQISKLLLKLTIYNSVICVVLIRWCEMEGIGC

>peptide 2 (38 aa)
QKIEDDEISKSKNKWECSLSTNKQSGVAATNALQIFHT*

Sequence

>CNT30712674
ACAAAAAATAGAAGATGATGAAATCTCAAAAAGCAAAAACAAATGGGAATGTAGTTTAAGTACAAACAAACAAAGTGGGGTGGCGGCTACAAATGCTTTG
CAAATTTTTCACACTTAGAAGCCTGGGGGCTTGTAGGCGATGAAGCTGATGCACTGCACTTGGCGAACGTTGTCGAATCCGATGATACGGATGAAGCCGT
TGGGGTATGCAGTCTTAGCCTCTTGAAGCTCCTTCAACACCTGAGAAGCATCAGTGCAACCAAACATAGGCAGCTTCCACATGGTCCAGTAGCGTCCATC
GTAGTATCCTGGTGACCTGTTGAATCCATCCCTTCCTAAGAAGCAATGGAGGTAATGTCATTGTTGGTCTTTCTGGTGGGGAAGCCAGCCATGGACTTGA
GGCCAGTGAATGGAGCAACCATGCCGGCACCGGCACGGTTGACAGTGGTAACAGCTGGGGAAGAGATCATTGAGGAAGCCATTTGCTTCTCCTTCTTAGT
TCTCAACTACTTGTTCTTCTGCTGCCAGATATCCAAGCTTCTGCTCAAACTTACTATATATAATAGTGTGATTTGTGTAGTACTAATCCGATGGTGTGAA
ATGGAGGGGATTGGTTGCT