Detailed information on CNT30611239


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Arabis alpinaArabidopsis thaliana42.729.5290.1191forward
CNT30236483Arabis alpinaBrassica oleracea87.7920.7890.37187forward
CNT30313622Arabis alpinaCamelina sativa42.7214.892.3191forward
CNT30263549Arabis alpinaBrassica rapa89.248.7281.05190forward

Expression of CNT30611239

Peptides detected in this lncRNA

>peptide 1 (62 aa)
RRQRGELEQDGERRRNYRLHETVELYTQSGRVWRVTRNVEMRRKMMILRQRKQVRSGVGNTR*

Sequence

>CNT30611239
CGGCGCCAACGAGGAGAGTTAGAGCAAGACGGCGAGAGACGGCGGAATTATCGTCTTCATGAGACTGTTGAGCTTTACACACAATCTGGACGGGTTTGGA
GAGTGACACGTAACGTTGAGATGAGGAGGAAGATGATGATCTTGCGGCAGAGGAAGCAAGTGCGCTCTGGTGTAGGAAACACGCGCTAGTTAATGTATGG
AGGTGAAACCAAG