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Detailed information on CNT30591229


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520108Musa acuminataSetaria italica22.0822.8888.5770forward
CNT30460105Musa acuminataSaccharum spontaneum22.088.6788.5770forward
CNT30595662Musa acuminataOryza meridionalis22.088.2285.7170forward
CNT30100373Musa acuminataOryza rufipogon22.0810.1287.1470reverse complement

Expression of CNT30591229

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKVPFVWVKKHPKLEPTTHCHPGPYLRSNSWNINTHKKRRG

Sequence

>CNT30591229
GTGATGCAACTTTTTGCCAATGTCTCTGAAGTTATAAACTAAGACAAGCAGAATTGGAGGGTCATGACATTTGATGTTCAGATCCAGCACTGATATATCT
GCACACATAGGCTTTCTCAAAAGGTGGTTTGGGTTGGCTAAGCAGCAGCTCCTTTGAAGATGAGAAAGTTGAGTGTCTCCAGGCAGAAGTAGATGAAGGT
GCCCTTTGTGTGGGTGAAGAAGCACCCAAAGTTGGAACCCACCACACATTGCCATCCAGGCCCATACCTCAGATCAAATTCCTGGAACATCAACACGCAC
AAGAAAAGAAGGGGATG