Detailed information on CNT30588944


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618136Musa acuminataSesamum indicum24.2414.0691.2580forward
CNT30711330Musa acuminataGlycine max23.3325.4188.3177reverse complement
CNT3046251Musa acuminataPrunus dulcis46.6751.1683.12154reverse complement
CNT30654007Musa acuminataRosa chinensis27.8829.7788.0492reverse complement
CNT30718122Musa acuminataMalus domestica golden34.5536.8985.09114reverse complement
CNT30354850Musa acuminataLactuca sativa23.339.6789.6177reverse complement

Expression of CNT30588944

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGRPGFYTIATNPSVVPLTIPNLTCPRLGYKPTLPGSA

>peptide 2 (37 aa)
DEYRKRKKVVVWSKEGRWAWWMRCAPTCYPPTVKREW*

>peptide 3 (45 aa)
TNIEKEKRWWSGLRRGGGRGGCDVRRPVILPPSRESGDRCSVKPA*

Sequence

>CNT30588944
GGACGAATATCGAAAAAGAAAAAAGGTGGTGGTCTGGTCTAAGGAGGGGAGGTGGGCGTGGTGGATGCGATGTGCGCCGACCTGTTATCCTCCCACCGTC
AAGAGAGAGTGGTGATCGCTGCTCTGTGAAGCCAGCCTGACGCGGTGCCCTCTGCTCTAAGAACCAAGAAGCACAGGCCTTCGCCCAAGCCGCATGGCTC
AGCTACCTGACTTGGAATGGGCAGGCCAGGCTTCTACACGATCGCAACCAACCCATCTGTGGTTCCTTTGACCATCCCAAACCTCACGTGCCCCCGCTTG
GGTTACAAGCCAACGCTACCTGGCTCGGCG