Detailed information on CNT30654007


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045914Rosa chinensisPrunus dulcis81.8882.1483.79253forward
CNT30588944Rosa chinensisMusa acuminata29.7727.8888.0492reverse complement
CNT30714740Rosa chinensisMalus domestica golden91.2691.5684.04282forward
CNT30154412Rosa chinensisPrunus persica56.9657.788.07176forward
CNT3026410Rosa chinensisPopulus trichocarpa32.3632.8990100forward
CNT30726065Rosa chinensisLupinus angustifolius20.0620.1393.5562forward

Expression of CNT30654007

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MWLGRRLWASWFLERRATREAGFTEQRSPPSLCSGKITGRCLRDPPWLAGLFHLNQHFF

Sequence

>CNT30654007
GCCGAGCTTTGTCACGCAAGCTTATAACCCAAGTGGGGGCGTGAGGGTGTTGGAACTTTGGTTCAGCATTAGCTAGTCGGGTTCGGAATGGCTGTATTCT
GACCCGCCCGTTCCAAGCAAGGAGTTGGGCTATGTGGCTTGGGCGAAGGCTCTGGGCTTCATGGTTCCTAGAGAGGAGGGCAACGCGTGAGGCTGGTTTC
ACAGAGCAGCGATCACCTCCCTCTCTTTGCAGTGGAAAGATAACGGGTCGGTGCCTTCGGGATCCACCATGGCTCGCTGGGCTGTTCCATTTGAACCAAC
ACTTTTTTT