Detailed information on CNT30588787


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCSAT001480, E-value = 3e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30529029Musa acuminataEucalyptus grandis57.5217.9283.38367reverse complement
CNT30549732Musa acuminataIpomoea triloba21.633789.13138forward
CNT30202139Musa acuminataPisum sativum20.0610.6884.38128reverse complement
CNT30565065Musa acuminataActinidia chinensis38.244.5282.79244reverse complement
CNT30214788Musa acuminataHelianthus annuus47.4994.9882.51303reverse complement
CNT30689226Musa acuminataTriticum urartu60.3420.7782.6385reverse complement

Expression of CNT30588787

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LVHVHSGLDLHVIILTSDGCSRGYIECHWSFSVF*

Sequence

>CNT30588787
CTCGTTCATGTGCATTCGGGTTTGGATTTGCATGTCATTATATTGACTTCTGATGGATGTTCGAGAGGCTACATAGAGTGTCATTGGTCATTTTCTGTGT
TCTAGTTCACCTTTAAGTGAAGAAAACCAAAGATTCAGGGTTAGAACTTGAGAAAGAAATAAGAGGCTAGTCGGTGGGCAATAAATTGTGTAAACATGTC
TAGCCACTATAGAAAGAAGGAAAAAAAGATCCAATCGACTAGTAAAGACTAGAAAAAATAGGCTTTCTACATATGCATCGTCTAAAGCAACGATTTTTAT
CAGCTGTAGCAAATAAAGAGACTTCACGAGAACCAAAATAGGAAGAAATAGATACAGCCTATATACTATACTCTATGGATAAAGGATTGAATTGATAGAG
AAAGCACCGTAAAGATCAATTAACAAACTATTGGGTCGATAGAGTTAAGAACTGCTTTGCTTACTTATGCCATAATACGGGATAAAAGTTAGGAATCAAC
TTATGTAATAGAGTCGATCCACTAAAGTATTGAGCAGCGGTGTAGCATCAGATCCCAAAGATAGTAAGTTCTTTTTTCTTATCTTATGGAGGAAAGTCTT
TTTCAAAGATTCTATATCTATATAAAATTGTGTAAACA