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Detailed information on CNT30689226


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 5e-48

BLAST vs NONCODE:
NONZMAT001155, E-value = 1e-117

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549732Triticum urartuIpomoea triloba9.4947.1884.09176reverse complement
CNT30221828Triticum urartuHordeum vulgare17.3136.694.39321forward
CNT30390237Triticum urartuTriticum turgidum66.7757.2997.91238forward
CNT30588787Triticum urartuMusa acuminata8.5824.9289.31159reverse complement
CNT30511784Triticum urartuSolanum lycopersicum12.6835.7792.77235forward
CNT30556045Triticum urartuOryza glaberrima26.1614.8692.78485forward
CNT30446760Triticum urartuSaccharum spontaneum49.7881.7592.74923forward
CNT3018049Triticum urartuZea mays51.5128.7992.98955forward
CNT30231162Triticum urartuAnanas comosus9.063086.9168forward
CNT30217417Triticum urartuKalanchoe fedtschenkoi8.6834.488.2161forward
CNT30214788Triticum urartuHelianthus annuus4.5326.3385.7184forward
CNT30595881Triticum urartuOryza meridionalis24.4344.1592.72453forward
CNT30369168Triticum urartuOryza glumipatula9.4447.9598.29175forward
CNT30103641Triticum urartuOryza rufipogon36.6898.8493.24680forward
CNT30575481Triticum urartuOryza barthii1137.9994.61204reverse complement
CNT30116349Triticum urartuOryza nivara10.980.1694.55202forward
CNT30558183Triticum urartuPanicum hallii11.6583.492.13216reverse complement

Expression of CNT30689226

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MDQQPNHPFYEKEGAWSYSNSKRFVIFNQFCASI*

>peptide 2 (32 aa)
MVYSYEISYKIEGIRNGYNEILDSILRPNLFD*

>peptide 3 (48 aa)
MVLFKFKALRNLQPVLCFNIISRSKRYSLFPIFSSLIKPSFRNFRITL*

>peptide 4 (31 aa)
MAGSGPFLKRCFYRIPIHNNFYFWFRRTNNH*

>peptide 5 (42 aa)
MKVHATQPKKDNGKLPEMSTKGMPYTPGQITSMTIEIVSISM*

Sequence

>CNT30689226
ATGAAAGTACATGCCACTCAACCAAAGAAAGATAATGGAAAGTTGCCCGAAATGAGCACTAAAGGTATGCCATACACCCCGGGGCAAATCACCAGTATGA
CTATCGAAATCGTGAGCATCAGCATGTAGGTTCCAGATCCAAGTGGTAGTATCAGGGCCCTTAGCTAGTGTTCTTGAGAAATGGCCGGGTCTGGCCCATT
CCTCAAAAGATGTTTTTACAGGATCCCTATCCACAACAATTTTTACTTCTGGTTCCGGCGAACGAATAATCATTAAGTCCTCCTCTTTCCGGACAAGACA
TACAAAGAGACCCGCCAACTGTCTTTTTAGTGAATCTTTGAAAGATATATATTTTGAAAGATAGATTTTGAAAGATAGATTTTGAAAGATAGATATTGTG
ATTAGTTCTTTTCTTTACTATCTACCATCCTTCTATTTTTTTTTTAGTTATTCACTGGAGCAATTATATATTGAAGTCAATCCGAGGCAAGTGTTCGGGT
CTATTATGACATAAAGATTAGGTGCCTAACGGACATTGTTTATCTTGAAAAACAAATATTTCTCGACGTAAGAAAAAAATCTTTTTTATTTTTAATTTAA
GAAACTAGTGTATTTTTTTTGAGGGCATAAGCTCCTATCTATATCTACTTTCCTTGAGCATAATATAGGGTTTTTTATTTGATTCTAAATTCCAAGATAA
CTCATTAGAATTATTAATAAGATGGTCCTAATATATTAGCAATATTTAGATTGCCCCCTCTTTTTATTCACTTTATTACTTCTATTCTAGACCCTATCCC
TATGGTTTATTCTTATGAAATATCATATAAAATAGAAGGTATAAGAAATGGATATAATGAAATTCTTGATTCGATCTTACGACCTAATTTATTTGATTAA
TGGATCAACAACCAAACCACCCATTTTATGAAAAAGAAGGAGCATGGTCTTATTCAAATTCAAAGCGCTTCGTAATCTTCAACCAGTTCTGTGCTTCAAT
ATAATTTCCCGGAGTAAGCGCTATAGCTTGTTTCCAATATTCAGCAGCTTGATCAAACCAAGCTTCCGCAATTTCCGAATCACCCTGTAGAATGGCCTGT
TCTCCTCGGTCGGAATAGGAAGTTCCTTCCCTTAGAACCGTACTTGAGAGTTTCCTACCTCATACGGCTCAGAAATTGCTATCTGAATTTCCCCTATCTT
AACTGAATTCGATTTATCAAAAATCGATCCAATTTGTTCTTGGGTTAAGCAGAAGAAATTAATTACCTAAGTTTCAAACCCTAATTTTTATCAATAATCA
GTTTGATCTTTTTTCCCACCTTCAGAAGAATGAAGCATAGATAGATATAGAGCCTTCGTTCAAATTTTCTGAGAGGTAACTATCCCGGTTTCATATATGA
AATCTCTATAGAATCCTTGAAAAAGACTTTTTTCCATAAGAAAGAAAAAAGAACTTACTATCTTTGGGATCTGATACTACACCGCTGCTTAATCCCTTAG
TGGATCGGCTCTATTACATAAGCGGATTCCTAAATTTTGCCCCATATCATGGGATAAGTAAGCAGTTTTTTTTAGTTGTATCGACCCAGTCGCTCACTAA
TTGATCTTTACGGTGCTTTCTCTATCAATTTGAGAAACTTTATCCATAGAGTAGTAGTATAGGCCATACTTTCTTCGTTTTTTGATTCTCGTGAAGTGTC
CTTCCTTCCTACAGCTGATAGGGAAAAATCGTTGTTTTTACGATCCCTATGTAGAAAGCCCTTTTTTTCTAGTATTTACTAGAAAATTTGATCCTCTCTT
TTTTTTTTTTCTTTCTATAGTGGAGATAGTCGCACGTAATGACAGATCACGGCC