Detailed information on CNT3058266


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30527430Amborella trichopodaEucalyptus grandis48.6428.1588.11143forward
CNT30632842Amborella trichopodaCapsicum annuum20.073.691.5359forward
CNT30223487Amborella trichopodaHordeum vulgare96.2621.1588.34283forward
CNT30555304Amborella trichopodaOryza glaberrima31.296.5390.2292reverse complement
CNT30627912Amborella trichopodaDaucus carota26.193.2596.177forward

Expression of CNT3058266

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLTIPHTKPSMTYRLPCLRKSFAKMETNRNNVRSCFWIEWKRDI*

>peptide 2 (33 aa)
IFRYRKISFFLPPWFSHNFLEKILDHRGTLSNE*

Sequence

>CNT3058266
ATATTTCGATATAGAAAGATCTCCTTCTTTCTTCCCCCTTGGTTCTCGCATAATTTTCTTGAAAAGATATTAGATCACCGTGGGACACTTTCAAACGAGT
AATGCTTACCATTCCTCACACAAAGCCTTCGATGACTTATCGGCTGCCTTGCTTGAGGAAGAGTTTCGCGAAAATGGAGACGAACCGGAATAACGTCCGA
TCTTGTTTCTGGATTGAGTGGAAAAGGGATATATGAAGTTCGTTCTGTTCCTCTGTGCATCTCTGTGATGGGTAAATCCCCATGAAAAAGGGAC