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Detailed information on CNT30632842


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3058266Capsicum annuumAmborella trichopoda3.620.0791.5359forward

Expression of CNT30632842

Peptides detected in this lncRNA

>peptide 1 (66 aa)
QRINTEKTTLISNQTPTTRTLHCKISKSHTNRTLPDNNHLNPIVLPLFRTDHMSLTRVCTKGTRIF*

>peptide 2 (60 aa)
MSQNLVLEATKELRIFFYLHLFICCRFFIIIYFFISSFIHLGREAKVVLNTSGARFEPKAR

>peptide 3 (35 aa)
TAYKHRKNNINQQSNTNDPNPTLQNLQIPYKPNLT*

>peptide 4 (33 aa)
MNRGESLLSENFEKISLGRFSNIPLYFQHLLRS*

Sequence

>CNT30632842
AACAGCGTATAAACACAGAAAAAACAACATTAATCAGCAATCAAACACCAACGACCCGAACCCTACATTGCAAAATCTCCAAATCCCATACAAACCGAAC
CTTACCTGACAATAATCACCTCAACCCGATCGTTCTCCCTCTTTTTCGTACCGATCACATGTCTCTCACGCGGGTTTGTACGAAAGGGACGCGGATCTTC
TAGAAAAAATCAAGGTGGCAGCTAGGGCGTGTTTCAAGGGATTATTTCACAAAAATTTGCTTTAATCCGTTGGGAATTGGTTGGATTTGGTACTATGAAG
GTACATATGTGCTAATTTCTGATTGGGGAAAAGGAATTTTGTTTCTTCTCAAGGTTCTCAAATTCAAAATTACTTCTAGAATTCCAATCTGAAGGCATGA
ATAGAGGAGAATCGCTACTATCAGAAAATTTTGAAAAAATATCTCTAGGGAGATTTTCGAATATACCCCTCTATTTTCAACATTTACTGAGGAGTTGAGC
TTCAGGGGATGTATTCTTGGATCCTCTATAAATAGCTCTCTTGAGAGCAGAAACGTGGGTCGAAAAATTCTGGGGTTTTTTTTGGGGCTCTAGGGTTCTA
AGTTGGGGGATTTTGGGGAGGTTCAGAAATTTTTCTTTTTTTTCTTTCAAGGGTTTGAAAGTTTAGGCTGAAAATTTTAGGGTTCGAAATTTCTTGAGTT
TGAAGGTTCGAGATAAATTTTTGTAAAACTGAAAGGAAATTCGGGAGTTCTAAATTCAGGTTGAATTTTTTTTAGTTGAAAGTGCTTTTCAAAATCTTTA
AGAGAAAAGCCAGAAGACACGCTATTGGTGGTCGACGTTGCGAGATTTCGATAGCGACGATTTTACTGATAGCTCGTCGTTCCGTTTGCTGCCCCAAAAG
AGAAATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTTGGAACTATATCAAGATTAGAATGACAAGGAATGTCCGTATCCGT
ATATAATAAGTTCGTTCTCTTTCTCTGTGCATCTCTGTGATGGGCAAATCTCCATAAAAAAGGGACAACTTTCGTGTAGTGGGGGTGCCCATGTGACTCG
TGATGGGCGTTTGATTATTCTAAGTTGAGATTCTGGTCTTCACGTTGTCAAACAGTCAACATTCTTTCTTTAGTTCAATTTGTAGTCAATTTCTGTTGAA
TGTAATTAATATCAGGAACTATTGGTTGCTATATAGCAGTGCTCATGTAGCGATTAAAACCTTTTCTTTTCCTTTTCTAAATTAGTTATAACTAGATTAA
TTTCTAAACCTTATCTTCTTTTCCTTTGCATGAACTCACTCGGAAGTCCAATTGGGCTCTTTATTTTTGCATTACACTACGGGCCACTGAGGCCTGCCCT
TTAGAAGACGTGAAAATCGATCACATAGTATATGGATACAAGGAGTCGTAAGACATGAATGAGCCAAAATCTCGTCCTTGAAGCAACAAAGGAACTGAGA
ATTTTTTTTTATTTGCATTTATTCATTTGTTGTCGTTTCTTCATTATTATTTATTTCTTCATTTCATCATTCATTCATTTGGGCCGCGAAGCCAAAGTTG
TACTTAATACAAGTGGAGCGAGATTTGAGCCAAAAGCTAGG