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Detailed information on CNT30535866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221336Eucalyptus grandisHordeum vulgare32.9817.881.3123forward
CNT30208990Eucalyptus grandisHelianthus annuus29.7618.0583.78111forward
CNT30624222Eucalyptus grandisDaucus carota30.5613.4687.72114forward
CNT30621504Eucalyptus grandisCajanus cajan36.198.5785.93135forward
CNT30115348Eucalyptus grandisEutrema salsugineum30.8317.0686.96115forward

Expression of CNT30535866

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAGRSQTHRSPLRSRAWSWTRSATTAAASC*

>peptide 2 (39 aa)
MRVAAACSEAAIFSPYSRSQTLCAKSVGEGRKKGFADKRG

Sequence

>CNT30535866
AATAGACACATTCATTCGTCGAATTCGTTCATTCAAAAGATAAACAATTAAAAGCCCCTCTACGACTCGAGCTGAGCATACCAGACACCCTGGATCTTCA
CATCCTTAGGCACCTTAGCTCCCAAATCAGTATCCGATGGCTGGACGCTCTCAAACACACCGATCACCTCTCCGGTCTCGGGCTTGGTCTTGGACACGTT
CTGCGACGACCGCAGCTGCGAGCTGCTGATCCTCCCCACCTTGGTGGGCTGCATGAGAGTAGCTGCCGCCTGTAGTGAAGCAGCCATTTTTTCTCCCTAC
TCTCGCTCTCAAACACTCTGTGCGAAGTCTGTGGGAGAAGGAAGGAAAAAGGGTTTTGCAGATAAGCGAGGTT