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Detailed information on CNT30506853


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30564637Nicotiana attenuataActinidia chinensis21.846.0686.9669forward
CNT30171839Nicotiana attenuataTrifolium pratense35.1314.8289.19111forward
CNT30144863Nicotiana attenuataMedicago truncatula35.1311.1886.49111forward
CNT30626732Nicotiana attenuataDaucus carota21.525.4385.2968forward
CNT30117377Nicotiana attenuataOryza nivara13.9221.5790.9144forward

Expression of CNT30506853

Peptides detected in this lncRNA

>peptide 1 (62 aa)
PSLDESRELAKGGFSSSLYTDDLVGITRIRHAILNALYIKALFLIKNHNMVTRVTIYSIQFP*

>peptide 2 (32 aa)
MVLCHGSERCCRRLSKGPFPTTLCCTMNPKNAN

Sequence

>CNT30506853
CCAAGTCTCGATGAGAGTCGAGAACTAGCTAAAGGGGGCTTTTCTTCCTCTTTATATACTGATGATCTAGTGGGAATAACACGAATAAGACATGCAATTT
TAAATGCCCTGTACATTAAAGCTCTATTCTTGATCAAAAACCATAACATGGTTACAAGGGTAACAATATATTCAATCCAGTTTCCATGAGGTTTCCTAGT
TGCTGAGTGTTTGGACAATGGTGTTGTGCCATGGGTCTGAGAGGTGCTGCAGAAGGTTGTCAAAAGGTCCCTTTCCTACTACATTGTGCTGCACTATGAA
TCCCAAAAATGCCAAC