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Detailed information on CNT30506278


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406606Nicotiana attenuataBeta vulgaris29.0428.4888.6488forward
CNT3096133Nicotiana attenuataSolanum tuberosum10010088.12303forward
CNT30542706Nicotiana attenuataBrassica napus26.7326.7386.4281forward
CNT30262244Nicotiana attenuataBrassica rapa26.7326.7386.4281forward

Expression of CNT30506278

Peptides detected in this lncRNA

>peptide 1 (32 aa)
PSSVTWACNPSGGINVVEYWAVPVGWIWWAQI*

Sequence

>CNT30506278
GCCGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCATTAATGTGGTGGAATATTGGGCTGTCCCAGTAGGTTGGATTTGGTGGGCTCAGATCTGA
CCTGCCCTATCCAAGCGCAGAGCTGTGTCACGTGGCCCAAGCGAAGGCATGGGCTGCTTGACTCCTAAAGTGGGGTGGACTGTGTGAGGCTGGTTTCACA
GAGCAACGAACAGCTCCCACTCTGAGCAGTGGAAGGATAACGGGCCAGTGCTTTTCAAGTCCAGCAACGCCTGATGGGCTACTCCAATTAAACTACCATT
TTT