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Detailed information on CNT30503976


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT002584, E-value = 4e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30635817Nicotiana attenuataCapsicum annuum60.6868.0684.53375forward
CNT3094818Nicotiana attenuataSolanum tuberosum5066.8885.11309forward
CNT30538793Nicotiana attenuataBrassica napus12.7820.4796.279forward
CNT30619768Nicotiana attenuataCajanus cajan12.6231.296.1578forward
CNT30429165Nicotiana attenuataPapaver somniferum12.9422.549580forward

Expression of CNT30503976

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPRMLSWVNLLPCSSCCLSLWQLQRMVVVCCLELH*

Sequence

>CNT30503976
AAAAGAAAAAAAAATGAGAACGCGAAGGGCAAAATGACCTGAAATTACTAGAATGTCCTACTAGGAGCTAGGGTTTGCTACCTCCTTATAAATAGAAGAG
GAGGCCACGGTTTCATGGTGAAAGCGGCGAAAGTCGAGAGATAAAGAGTGAGCCATCGGTGAAATTTGAGCAAGGATGAGGGCCAAGTGGAAGAAGAAGC
GTATGAGGAGACTGAAGAGGAAGCGCAGAAAGATGAGACAGAGATCTAAGTAGAGCAGGGTTCTAGATGCCTAGGATGCTTTCTTGGGTGAATCTGCTGC
CCTGTTCCTCTTGCTGTCTATCTCTCTGGCAGCTCCAGAGAATGGTGGTTGTCTGTTGTTTGGAGCTGCATTAATTAATCTACTATCTTCTATGAAGGAG
CTTAGTTTAGTTCTTCTATTACTTGTAAGGATGTTGATTTGTGTTTTTGGGGCAACTTGCTAGTTTTGTCCACCTAAGATATATGGGAGATTATCCTGAA
CCTATTCTCTTTTAAGCTGACTTTCTTGAGAGGATTTCTGTTTGCCTGGATTGCATCTCGTTTGATTATAGTTTGACTGAATGTTATGCTTCGAGTGATG
TTCTTGAGATGAATTGTC