Detailed information on CNT30567016


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 2e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317742Actinidia chinensisCorylus avellana2443.383.26239forward
CNT30487902Actinidia chinensisOlea europaea13.8628.3484.06138forward
CNT30208251Actinidia chinensisHelianthus annuus19.7839.6479.7197forward
CNT30713171Actinidia chinensisMalus domestica golden9.1425.9383.5291forward
CNT30572762Actinidia chinensisVitis vinifera14.9621.4185.91149forward

Expression of CNT30567016

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRVKMQKWVWLKHTWQNKMQSCIQVWLWWLYCRMVHLGH*

>peptide 2 (66 aa)
MSVGTCAFSGLRRAVVKAVAVAVSLNAGKDAEMGLAEAHLAEQDAVLYSSMAVVVVLSNGAPWALA*

>peptide 3 (32 aa)
MGAQMIHCSCWQQSGSHLDLDSFLIWHLMGTC*

>peptide 4 (34 aa)
EADLPEPKPSSHLTHELTSPRRYGAKPQQVSSHS*

>peptide 5 (36 aa)
MQMNWVVLSREDTCSLWGCWKIGGENSRYTLLMRLQ*

Sequence

>CNT30567016
CAGAAGCAGATTTACCTGAACCAAAGCCCAGCTCACACCTAACACACGAATTGACAAGCCCACGAAGATACGGCGCAAAGCCTCAACAAGTTAGCTCACA
CTCGTAGGAATCGAAATTAGATAACTTCGATTTGTGAAGAAGATGAGAAGTCCAGACTCCAGAAACAGGCAGATCTGCTGGAGGCGCCACCAATGATTGC
AATTCCCCTACGCCATTCTCTACAAGGAAAGCCATAGCCAATCCCCAGGTACACTAGCTGTATTCCTCATTGGTGGATCAACAAGGTTAAACTTTGATGT
ATCAGTTTTAGGATTGAAGTTTCCAAAGCCCTCTGCGATGATGTAAAAGTCATAACCATGCAGATGAATTGGGTGGTTCTCAGTCGTGAAGATACTTGTT
CCCTGTGGGGATGCTGGAAAATTGGTGGTGAAAACTCCAGGTATACCTTGCTGATGCGCTTGCAGTAAGGAGAAGTTGGATGGGAGCACAAATGATACAT
TGTTCATGCTGGCAGCAAAGCGGGTCCCATTTGGACCTTGACAGTTTCTTGATTTGGCACCTGATGGGCACCTGTTAAGTCCCAGACCAACTGTGAAGAA
GAGGCTTTCGTCAATGTCGGTGGGCACCTGTGCTTTCTCAGGACTTCGAAGGGCAGTAGTGAAGGCCGTGGCCGTGGCGGTATCATTAAATGCGGGTAAA
GATGCAGAAATGGGTTTGGCTGAAGCACACTTGGCAGAACAAGATGCAGTCTTGTATTCAAGTATGGCTGTGGTGGTTGTATTGTCGAATGGTGCACCTT
GGGCACTAGCATAGGCACGTGCTGCAATGTAGTATCGTGCTGGTGGCTGGTTAGCGGTGATTAGGACATCGGTGGTTTGACCTGGTCCCAACATGATGAC
TGAGGTGGTGAAGGGTTTGAGATAGGAAGCATCAGCTCCAACGACCGTGAACTTGTGGTTGGCTATGGTGAAGAAGAGCTGTTGGTTCATTGCAGC