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Detailed information on CNT3093762


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30487902Solanum tuberosumOlea europaea35.7840.0483.08195forward
CNT30634402Solanum tuberosumCapsicum annuum30.094.2885.98164forward

Expression of CNT3093762

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MNKHCNHGTRSYQQTGRSTGGVSNDSNWLTPFSTRNAMAKPQVAQLGNQLRKHQECHCDVLVAGKNWMVAQKIYCSYWQ*

>peptide 2 (45 aa)
RKCLQAKFAEITNYADRSTSVAGGKTYQCPHHIDRQSPEELKLKG*

>peptide 3 (40 aa)
ENVCKQNLLKSQIMLIGVLQSPAGKRTNAPTILTARARRN*

Sequence

>CNT3093762
AGAAAATGTTTGCAAGCAAAATTTGCTGAAATCACAAATTATGCTGATCGGAGTACTTCAGTCGCCGGCGGGAAAACGTACCAATGCCCCCACCATATTG
ACCGCCAGAGCCCGGAGGAACTGAAGCTCAAAGGCTGATGAACAAACATTGCAATCATGGAACGCGAAGTTATCAGCAGACAGGCAGATCTACTGGTGGA
GTTTCCAATGATTCCAATTGGCTGACTCCGTTTTCAACGAGGAACGCCATGGCCAAACCCCAGGTGGCACAGCTGGGAAATCAGTTGAGAAAACACCAGG
AATGCCATTGTGATGTGCTTGTAGCAGGGAAAAATTGGATGGTAGCACAAAAGATATATTGTTCATACTGGCAGTGAATCGAGTTCCATTTGGACCTTGA
CAGTTTTTAGAGCGTGCACCTCTTGGACAATTGTTAAGTCCTAGCCCAACAGTGAAGAATAGATTTTCATCGATTTCCTTGGGTACCTCGACCTTTCTTG
GGCTTCTGAATTTTGTTGTGAAGGCTGTAGCAGTGGCTGTGTCAT