« Back to Malus domestica golden search


Detailed information on CNT30713086


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 1e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317742Malus domestica goldenCorylus avellana29.6821.5686.55119forward
CNT30487902Malus domestica goldenOlea europaea40.433.2680.25162forward

Expression of CNT30713086

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MLFGSTKDTLFMLAVKRVPFGPWHLLALKCLGQLLSPRPIVKKRFSSISVGTSTFLGLLKLLVKAEAVFVSLKAGSCAIIGLAAELFLQLGLQGA

>peptide 2 (55 aa)
MFRAIVESKTDSEEEIFIDFSWDFNFSWTSETLGESRSSVCVIESRELCHNWFGC*

Sequence

>CNT30713086
CTGCCATAGAGAACTGCTCACATTGCCCGTGTAGTCGAATTTCTTCGGAGGGTTTGCTGGAAAATCATTGGTGAAAACTCCAGGGATGTTTTGTTGGTAA
GCCTGAAGGATTGACATGTTATTTGGAAGCACGAAGGACACATTGTTCATGCTGGCAGTGAAGCGTGTCCCGTTTGGGCCTTGGCACCTTCTGGCTCTGA
AATGTTTAGGGCAATTGTTGAGTCCAAGACCGATAGTGAAGAAGAGATTTTCATCGATTTCAGTTGGGACTTCAACTTTTCTTGGACTTCTGAAACTCTT
GGTGAAAGCAGAAGCAGTGTTTGTGTCATTGAAAGCAGGGAGTTGTGCCATAATTGGTTTGGCTGCTGAACTGTTTTTGCAATTGGGGCTGCAAGGGGCA
G