Detailed information on CNT3041011


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520958Chlamydomonas reinhardtiiSetaria italica35.597.1790100forward
CNT30480504Chlamydomonas reinhardtiiArabidopsis halleri25.2721.6588.7371forward
CNT30644072Chlamydomonas reinhardtiiCannabis sativa23.4914.7787.8866forward

Expression of CNT3041011

Peptides detected in this lncRNA

>peptide 1 (92 aa)
LAGQGTLGTLGLAAQLLQGAGVAANVLLVLLLDQLDEVLHDALVKVLTAQVEHQDVLLAALLVQAVGDGSGSGLVDDAHHVQARNGAGVLGGL

>peptide 2 (65 aa)
WLDRARLARSASRRSFCRARASPLMSFLYFFLISLMKYSMTRWSKSSPPRSNTRMFFSPPFLSRP*

Sequence

>CNT3041011
GCTGGCTGGACAGGGCACGCTTGGCACGCTCGGCCTCGCGGCGCAGCTTCTGCAGGGCGCGGGCGTCGCCGCTAATGTCCTTCTTGTACTTCTTCTTGAT
CAGCTTGATGAAGTACTCCATGACGCGCTGGTCAAAGTCCTCACCGCCCAGGTCGAACACCAGGATGTTCTTCTCGCCGCCCTTCTTGTCCAGGCCGTAG
GCGATGGCAGCGGCAGTGGGCTCGTTGATGATGCGCACCACGTTCAGGCCAGAAATGGTGCCGGCGTCCTTGGTGGCCTGG