Detailed information on CNT304519


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522927Zea maysSetaria italica52.7567.2997.92144forward
CNT30135077Zea maysLolium perenne46.8921.6988.28128forward
CNT30681820Zea maysTriticum urartu46.5239.3292.91127forward
CNT30557828Zea maysPanicum hallii3745.799.01101forward

Expression of CNT304519

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MWESRMVKSPRDSGFRLCSFSTCRVMVIRSVRCASAAWSISPPPSPRSSLAPNSAT*

>peptide 2 (82 aa)
PASPMSWASPALLTAEDDVGEQDGEVAAGLGVPALLVQHVPRDGHQVRPVRVRRVVHLASALPSLEPGSEFSYLASRIAVWW*

Sequence

>CNT304519
GCCGGCGAGCCCGATGAGCTGGGCGAGCCCGGCCTTGTTGACGGCGGAGGACGATGTGGGAGAGCAGGATGGTGAAGTCGCCGCGGGACTCGGGGTTCCG
GCTCTGCTCGTTCAGCACGTGCCGCGTGATGGTCATCAGGTCCGTCCGGTGCGCGTCCGCCGCGTGGTCCATCTCGCCTCCGCCCTCCCCTCGCTCGAGC
CTGGCTCCGAATTCAGCTACCTAGCTAGCAGGATAGCGGTGTGGTGGTGATCACGGAGTGCAGTGAGCGCGCG