Detailed information on CNT30681820


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522927Triticum urartuSetaria italica39.3259.3592.13127forward
CNT30135077Triticum urartuLolium perenne40.2522.0393.08130forward
CNT304519Triticum urartuZea mays39.3246.5292.91127forward

Expression of CNT30681820

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MTRTYRKEMPDIRITLPAKDDVGEEDGEVAARLRVPALLVQHVPRDGHQVRPERVRRVIHLPSPTPTLSPVRSLSS*

>peptide 2 (37 aa)
MWERRMVRSPRDSGCRLCSFSTCRVMVIRSVRNVSAA*

Sequence

>CNT30681820
GAAGCCTTGGCTGCTCATGAATGAAGCTGTTCGAGGCCTCCACACGCTATATTACACTGAATGACACGGACGTATAGAAAAGAAATGCCTGACATACGAA
TCACATTGCCAGCAAAGGACGATGTGGGAGAGGAGGATGGTGAGGTCGCCGCGCGACTCCGGGTGCCGGCTCTGCTCGTTCAGCACGTGCCGCGTGATGG
TCATCAGGTCCGTCCGGAACGTGTCCGCCGCGTGATCCATCTTCCTTCTCCGACGCCGACCCTCTCTCCCGTTCGCTCGCTCAGCTCGTAGGAGAGTTGG
TACGTGTTGCGGGCTTTGCTTGC