Detailed information on CNT30441680


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB22|METK3_HORVU, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225303Aegilops tauschiiHordeum vulgare10071.3894.69207forward
CNT30650534Aegilops tauschiiRosa chinensis33.827.5185.7170forward
CNT30570674Aegilops tauschiiVitis vinifera41.559.1190.786forward
CNT30557997Aegilops tauschiiPanicum hallii25.610.7510053forward

Expression of CNT30441680

Peptides detected in this lncRNA

>peptide 1 (67 aa)
DDEAARRVQVEDGVLIEVLCGDHRLDDMLLEVLCGDHRLDDMLLEVRSNLVVGDGLVVLGGDEDGVHT

>peptide 2 (67 aa)
MTKRPDGFRWKMVFSSRYFAGITGLMTCSLRYFAGITGLMTCSLRSAAISSLVTVSSCWVEMRTVCTR

Sequence

>CNT30441680
CGATGACGAAGCGGCCAGACGGGTTCAGGTGGAAGATGGTGTTCTCATCGAGGTACTTTGCGGGGATCACCGGCTTGATGACATGCTCCTTGAGGTACTT
TGCGGGGATCACCGGCTTGATGACATGCTCCTTGAGGTCCGCAGCAATCTCGTCGTTGGTGACGGTCTCGTCGTGCTGGGTGGAGATGAGGACGGTGTGC
ACACGAA