Detailed information on CNT30225303


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB23|METK2_HORVU, E-value = 2e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381356Hordeum vulgareManihot esculenta30.6930.5889.8989forward
CNT30508429Hordeum vulgareSolanum lycopersicum28.6233.685.5483forward
CNT30441680Hordeum vulgareAegilops tauschii71.3810094.69207forward

Expression of CNT30225303

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MTKRPDGFRWKMVFSSRYFPGITGLMTCSLRYFAGITGLMTCSLRSAAISSLVTVSSCWVEMRTVCTRTGTM

>peptide 2 (95 aa)
GSPATVGVDDDLAAGETGIAMRAADDEATRRVQVEDGVFIEVLPGNHRLDDMLLEVLCGDHWLDDMLLEVRGNLVVGDCLIMLGGDEDCVHTNRYH

Sequence

>CNT30225303
GGGCTCCCCAGCCACCGTAGGTGTCGATGATGATCTTGCGGCCGGTGAGACCGGCATCGCCATGAGGGCCGCCGATGACGAAGCGACCAGACGGGTTCAG
GTGGAAGATGGTGTTTTCATCGAGGTACTTCCCGGGAATCACCGGCTTGATGACATGCTCCTTGAGGTACTTTGCGGGGATCACTGGCTTGATGACATGC
TCCTTGAGGTCCGCGGCAATCTCGTCGTTGGTGACTGTCTCATCATGCTGGGTGGAGATGAGGACTGTGTGCACACGAACAGGTACCATG