Detailed information on CNT3044110


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376493Prunus dulcisArabidopsis thaliana25.611.388875reverse complement
CNT30268805Prunus dulcisChenopodium quinoa25.266.8889.1974reverse complement
CNT3090321Prunus dulcisSolanum tuberosum24.9111.1189.0473forward
CNT30251599Prunus dulcisAvena sativa24.9111.3287.6773reverse complement
CNT30613398Prunus dulcisArabis alpina25.2610.0489.1974reverse complement
CNT30650745Prunus dulcisRosa chinensis25.2631.3610074forward
CNT30414507Prunus dulcisPapaver somniferum25.266.4991.8974reverse complement
CNT30328380Prunus dulcisAsparagus officinalis25.69.8989.3375forward
CNT3063925Prunus dulcisSelaginella moellendorffii23.554.3388.4169reverse complement

Expression of CNT3044110

Peptides detected in this lncRNA

>peptide 1 (34 aa)
GDRTLYLPHAKRALYHLSYIPNLLNKLIIFLFHV*

Sequence

>CNT3044110
GGGGATCGAACCCTGTACCTCCCGCATGCAAAGCGGGCGCTCTACCATTTGAGCTACATCCCCAATTTGCTAAATAAATTAATCATATTCTTATTTCATG
TATAGATGAAACAAATGGCAGCGCTCGCTTTGCATGCGAGAGCCACGGTTATTTGGAAGTTGGAATATTAAGATGGTGGGTTTTCTTAAAGTTTTAATGT
CCTTTTTATAATAAATTGGGGATGTAGCTCAAATGGTAGAGCGCCCGCTTTGCATGCGGGAGGTACAGGGTTCGATCCCCTGCATCTCCATTG