Detailed information on CNT30328380


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044110Asparagus officinalisPrunus dulcis9.8925.689.3375forward
CNT30650833Asparagus officinalisRosa chinensis9.8924.7590.6775forward

Expression of CNT30328380

Peptides detected in this lncRNA

>peptide 1 (32 aa)
HLSEPRAPPCLLCHVGLTPLLLLLTWFSRRRF*

>peptide 2 (29 aa)
MQRHHKETFCLAHVKLIFNQLFCFYRNEM*

>peptide 3 (91 aa)
TFLSRGPHLVSSVTWASLLSFFSSRGFPAGGSDGDAIVVEGKTAADLASEASDLAPKIGFTSYNCISSLGKRLRGDSGEEALTPVSCKRIK*

>peptide 4 (66 aa)
MSISIKPFVVFSFLFFRFECNCGCKRIENGIDMGLSINASFSLGSLCYCFVCWRKDLHEIVNGCLV*

>peptide 5 (34 aa)
MVERSLSMREVRGSIPRISIDYFFLKLLELNGEK*

Sequence

>CNT30328380
CACCTTTCTGAGCCGCGGGCCCCACCTTGTCTCCTCTGTCACGTGGGCCTCACTCCTCTCCTTCTTCTCCTCACGTGGTTTTCCCGCCGGAGGTTCTGAC
GGCGACGCCATCGTCGTTGAGGGCAAGACCGCCGCAGATTTGGCAAGCGAAGCATCGGACCTCGCTCCTAAAATTGGTTTCACTTCCTACAATTGCATCA
GTAGTTTGGGAAAGAGGCTGAGAGGAGACTCAGGAGAGGAGGCGTTGACGCCAGTTTCCTGTAAAAGAATAAAATGAGCATTAGTATTAAACCCTTTGTA
GTTTTTTCATTTTTATTTTTTCGCTTTGAATGTAATTGTGGTTGCAAGAGGATTGAGAATGGCATTGACATGGGCCTCAGCATTAACGCAAGTTTCTCAT
TAGGTTCGTTGTGCTATTGTTTTGTCTGTTGGCGAAAGGATCTACATGAAATAGTGAATGGATGTCTTGTTTGAGCACAACATGGGGATGTAGCTCAGAT
GGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATCGACTATTTTTTTCTGAAGTTGCTTGAGCTGAACGGAGAGAAG
TAAACGACAACTACCTTTGACTTCAGTCCGCTTTCATCAATAATGTATAGTCATCAAGATGCAACGTCATCATAAAGAAACTTTTTGTTTAGCTCATGTT
AAATTGATTTTTAATCAGCTATTCTGTTTTTACAGAAATGAGATGTAGAGGAAAGAGC