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Detailed information on CNT3090321


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044110Solanum tuberosumPrunus dulcis11.1124.9189.0473forward
CNT30650833Solanum tuberosumRosa chinensis11.1124.0990.4173forward

Expression of CNT3090321

Peptides detected in this lncRNA

>peptide 1 (39 aa)
GDVAQMVERSLSMREVRGSIPRISKLYRFLLFFVLCNSY*

Sequence

>CNT3090321
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAAATTGTATAGATTTTTGCTATTTTTTG
TGCTCTGCAATTCATACTGACCAAAATAGAATCAAAAGCAGTACAACAATTTACACAAGTCTGCATTTCATCAAATTGAAGAACATACCATAATCCGTAA
TCATATACGGTAAACATATATCGTACTTCTAAACACTTGAATGAAGGTAATAGATTACATAGATGTAAATCGAGTTATAATTCGTAGATGCATAACTAAT
GGATCCGAGTTAAGATGAAAGCATGTAAAAACTGTCTTGCACAAAAAGGACTAACAAATCTACTTGACTACCCTTTTTACTGATGATACACATGTTATAT
GTCTGATGCTTGACAGCTTGATCTAGACGTTCACTCCAACAAAATATTTACCTTATTTATAATCTTGTATGTATGCATTTCATCTGGTGCTAACGAGAAC
TGTGAGGTAGTAACATTTGTAAAGGAGAGACTTTGTGGCGAGTGGCGACTAACAGCACAGAAGAAATCTGGAGCCAGTTTGTACAAGAACTAGCATGTTC
TCACACTCATTGACAAGCCTCTCACAGCAACTTTTACAGCAGCAACGACACCACGCT