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Detailed information on CNT30385831


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179441Triticum turgidumSecale cereale94.5398.9998.47588forward
CNT30436234Triticum turgidumAegilops tauschii53.5410098.5333reverse complement
CNT30680235Triticum turgidumTriticum urartu53.54100100333forward
CNT30151616Triticum turgidumBrachypodium distachyon19.7726.3495.93123forward

Expression of CNT30385831

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MHIRISHHSEQSRQRHACWDLQEDIFHGCTGHKGFLSWGSSVQQQWLGVQPTQHLGSVEQVFQPKKS

>peptide 2 (49 aa)
MSVGTGFRLLAYEHLVIFQETVGGHLKTNFKTRRRSSDAYTNLPPLRTK*

Sequence

>CNT30385831
CGGGAACTTGAATGAATAACATTGTTATAGACACAAAAGATGAAGAATAGTATGTTTGCTTATTTATCAAATATATAGGGAGCAAGGACCAGAAGAGGTA
TACAATATCCTTCCGATAGGGTCTCAGAAAATCAGTATAAAACAACTTACAATCCAGTAGCAACATAGGAGAAACAATTATTTCGCACTGCAAATGAACT
TCAGTAGGTAACAGTGGATCACCGTTGCGATAGTCCTGAAACAAAAACTCCTAGCCACATTGAAAACAAAATAACAGCGCAACAGGAATTCACTCCTGTC
GAGAATATATGTCGGTAGGTACTGGTTTTAGGCTCTTAGCCTATGAGCATCTTGTTATCTTCCAAGAAACTGTAGGTGGGCACCTCAAGACAAACTTCAA
GACAAGGAGACGCAGCAGTGATGCATATACGAATCTCCCACCACTCAGAACAAAGTAGGCAAAGGCACGCTTGCTGGGATCTCCAGGAGGATATCTTTCA
TGGTTGTACTGGTCATAAAGGATTTTTGAGTTGGGGTTCTTCAGTGCAGCAACAGTGGCTGGGAGTTCAGCCAACCCAGCATCTTGGTTCCGTGGAACAA
GTGTTTCAGCCGAAGAAAAGCC