Detailed information on CNT30434598


BLAST search results

BLAST vs Swiss-Prot:
sp|P32035|YCX1_CUSRE, E-value = 3e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222305Papaver somniferumHordeum vulgare46.4812.3685.45165forward
CNT30564479Papaver somniferumActinidia chinensis65.6326.0687.55233forward
CNT30227586Papaver somniferumAnanas comosus26.225.7690.3293forward
CNT30721105Papaver somniferumTriticum spelta40.2867.7786.01143forward
CNT30150293Papaver somniferumBrachypodium distachyon24.795.2286.3688reverse complement
CNT30576783Papaver somniferumOryza barthii87.895282.69312forward

Expression of CNT30434598

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MDPCVVTFHLGLGIGVIGPAFYIFLVIWVPY*

>peptide 2 (41 aa)
MFTYGSLRRYIPFRIRNRRNRTCFLHISRYLGTILTSLGFY*

Sequence

>CNT30434598
ATTCGAGCGTATGTAAATAGATACTATGTTTACATATGGATCCCTGCGTCGTTACATTCCATTTAGGATTAGGAATAGGCGTAATCGGACCTGCTTTTTA
CATATTTCTCGTTATTTGGGTACCATATTGACTTCTTTGGGCTTCTATTGAATCGAGAAGTAGGTTTGATTGTACATCTTTTTGATATATCTAAGGTATC
CTCCGGATAATTCAAATCGAAGCAATTGGATGTCCGACTCGGGCCTATATGACATGACCGATCGATAGAAATACTCCAACACTCCACCCTTGTCATATAT
TCCCATACATCACACTAGATAGATATCATATTCATGGAATACGATTCACTTTCAA