Detailed information on CNT30227586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222305Ananas comosusHordeum vulgare20.785.6289.3375forward
CNT30721105Ananas comosusTriticum spelta23.5540.2892.9485forward
CNT30434598Ananas comosusPapaver somniferum25.7626.290.3293forward
CNT30576783Ananas comosusOryza barthii21.3312.8392.2177forward

Expression of CNT30227586

Peptides detected in this lncRNA

>peptide 1 (60 aa)
IDPYVQPFYDGLGRGVIRPAFDISILSYPPDNSNRSNLMSDSSLYDRSIEILQHSTINAH*

Sequence

>CNT30227586
ATTGATCCCTACGTCCAACCATTCTATGACGGATTAGGAAGAGGCGTAATCAGACCTGCTTTTGACATATCTATCCTATCGTATCCTCCGGATAATTCAA
ATCGAAGCAATTTGATGTCTGACTCAAGCCTATATGACCGATCGATAGAAATACTCCAACACTCCACCATTAATGCTCATTGAATGAGCAATTCAATAAC
AGATTTCGGATCTAATCAATATTGAGATACCGATTCTGTTTTCATTTTATACGAAGTACTTCGGTGATCCCCACGATTCAAGTCTGAGCTGTTGGAATTG
GAATAGGTTCGATAGTGGATCACGAAATTTTGGCGATCTTCTCTATCTAATGAATGAGTAG