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Detailed information on CNT3040158


BLAST search results

BLAST vs Swiss-Prot:
sp|P52777|PALY_PINTA, E-value = 2e-112

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315733Marchantia polymorphaCorylus avellana32.4235.3778.31249forward
CNT30435636Marchantia polymorphaAegilops tauschii19.5321.7482.67150forward
CNT30242796Marchantia polymorphaAvena sativa18.2334.0683.57140forward
CNT30572080Marchantia polymorphaVitis vinifera18.6222.7382.52143forward
CNT30149709Marchantia polymorphaBrachypodium distachyon18.364785.11141forward

Expression of CNT3040158

Peptides detected in this lncRNA

>peptide 1 (33 aa)
ARYPVLATSSPCPRVIWYPEILQSRRADSFCSR*

>peptide 2 (58 aa)
MSLKISIASSVLRAEMRPREFTSWLCCSALCTWVVTGLAKYKSSEVYDAMAISAPLNP*

>peptide 3 (44 aa)
MAHEALPQLLHQRVGCAGCIVDVGEWRLVVNHFEEILLTEPRWQ*

Sequence

>CNT3040158
GCTCGATATCCTGTCCTGGCGACCTCGTCTCCGTGCCCACGAGTAATTTGGTACCCAGAGATCTTACAAAGTCGTAGAGCGGATAGCTTCTGCAGTCGCT
GATTCTGTTAGGTACGGCAGCGACGCCATTGTCGAACTGCTCTCTGACTTTGGCCACCGTGGCTTCGAGATCAGTCTTGACCTGCTCCTCGAAGACTGAG
ATTCTTCTGAAAACACTGCATCTCTCCTCTTCATTCTCGGAACTGAGAGCATGGCTCACGAGGCACTGCCTCAGCTTCTGCATCAGAGGGTAGGATGCGC
TGGTTGCATCGTCGATGTAGGAGAATGGAGGCTGGTTGTCAACCACTTTGAGGAGATCCTTCTCACAGAACCGCGATGGCAGTAGGCAGCCTTGGGCATC
GGTGAAGAGAGTCTTCTTCGCCGCTTGAGAGACAACATTCTGGACACTCACTTGCATGTTCTCCTCCAGGTGCCGCAGATCCACTGCCTGGCACAACGCC
ACCAAATAGGTGGAGCACATGAGCTTGAAGATCTCGATAGCTTCCTCTGTTTTACGAGCTGAGATGAGACCCAGAGAGTTCACGTCCTGGTTGTGTTGCT
CTGCACTCTGCACGTGGGTGGTCACTGGGTTGGCCAAGTACAAGAGCTCCGAGGTGTACGATGCCATGGCTATCTCCGCTCCTTTGAATCCATAGTCCAA
GCTCGGGTTGGGACCTCCCGTCAGATTCGATGGAAGCCCGCCGTTATAGAAGTCGTTGACGAGCTCCG