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Detailed information on CNT30393731


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30492767Triticum turgidumOlea europaea20.188.4492.7569reverse complement
CNT30224157Triticum turgidumHordeum vulgare89.7776.7593.16307forward
CNT30137423Triticum turgidumLolium perenne28.9524.4493.9499forward
CNT3011623Triticum turgidumZea mays20.7617.5794.3771forward
CNT30219095Triticum turgidumKalanchoe fedtschenkoi20.473.6494.2970forward
CNT30207452Triticum turgidumHelianthus annuus18.1322.2291.9462reverse complement
CNT30722140Triticum turgidumTriticum spelta86.8454.795.96297reverse complement
CNT30363122Triticum turgidumSorghum bicolor21.3518.6795.8973forward
CNT30408983Triticum turgidumPapaver somniferum21.3513.993.1573forward

Expression of CNT30393731

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPSSLDAWQPGCRMMLPLLQGAYLDRCLIFRRFLLSLLILFFFHCKFK*

Sequence

>CNT30393731
TCGGAGTACCTCAAGGATAATAGGTGCATAAAATTCAGTCACAAACACATATAATCCTCACATTACATAAAACTCAGTCCTGGAACATAGCCAGACTAGT
ATTAAACAGCTAAATTTGACCAAACACAGGTAAAACAGCTTCCACAGCCATAGCAGCAAACACGCCAGGAATCACTAGACCATGCCGTCCTCCCTCGATG
CCTGGCAGCCTGGATGTAGGATGATGCTTCCCCTGCTCCAAGGCGCCTACTTGGATCGCTGCCTCATCTTTCGGCGCTTCCTCTTGAGCCTCCTCATCCT
CTTCTTCTTCCACTGCAAATTTAAGTAACCGCACAGTTCATC