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Detailed information on CNT30408983


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393731Papaver somniferumTriticum turgidum13.921.3593.1573forward

Expression of CNT30408983

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSWEQLKNSAPTIMYPVIFLTTAALVDTSGFCG*

>peptide 2 (37 aa)
MTNNRNSNTTLYLEKDAIAFPLCSELLYNMSLQKSNR*

Sequence

>CNT30408983
GCACTGCAAAATCATCAAAAATAAATTAACCTAAATTATGACAAACAATAGAAATTCAAACACCACATTGTATTTAGAGAAAGATGCCATAGCATTCCCA
CTGTGTTCAGAACTACTATATAATATGTCTCTACAGAAGTCAAACAGATGAATCAAGAGACATCTGTTTGTTTGGAAGAAACTAAAACTGCAAAATGTCT
TGGGAACAATTAAAAAACTCAGCCCCAACTATCATGTACCCTGTTATCTTCCTTACTACAGCAGCTTTGGTGGATACTTCAGGCTTCTGTGGGTGAGCAA
GATACTTCAGGCATATGTCAAGAAGGAACCAGCAGTCTTCAACGTCCCTCTTCAACCGAAAGTAATCTACTTGGATCTTTGTCTCATCTTTCGGCGCTTC
CTCTTAAGTCTCCTCATCCTCTTCTTCTTCCACTGCAAAGAGTGGCAAGAAAAGAAGAAAACATCTTAGTTCCTTTTCTTAAAGGACCAGTCATCAATAC
TCAATTTACAATCAAACTACAGCAT