Detailed information on CNT30219095


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677986Kalanchoe fedtschenkoiSetaria viridis3.5421.7395.5968reverse complement
CNT30393731Kalanchoe fedtschenkoiTriticum turgidum3.6420.4794.2970forward
CNT30467175Kalanchoe fedtschenkoiSaccharum spontaneum3.2326.596.7762reverse complement

Expression of CNT30219095

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGSRIGALNLNLKVEAVPDLIRKGSSGRREVVAL*

>peptide 2 (30 aa)
MRRGSPGKSPQNLLISKTNKCSKITNKVLT*

>peptide 3 (32 aa)
MGSSPVGTAFTFRYAGGARELARSEYERTLSR*

>peptide 4 (43 aa)
MVFCGRVVVWLIGHSLLLELGSCLHELVFGFLTGLEGRNLLNV*

>peptide 5 (52 aa)
MSVHYQGRGGVRPLAPKGKWETTIDPLKKKKMFQNYNWKEKLWRAADQLLRY*

>peptide 6 (40 aa)
MIFLGGLDCYTLQSVILFIHEFTYFTSGIYCSWLHAIFEG*

>peptide 7 (42 aa)
MDRVFEWCVAWGEKGVVSIRSSLTRTWCVDVYRIPNLMFLSS*

>peptide 8 (30 aa)
MNLLILLLVFIVAGFTQFLKGDLRFSNLHW*

>peptide 9 (38 aa)
DFSLILIQKDDNLEGQRSPFQTGIHGKLGLWVVGFEFG*

Sequence

>CNT30219095
CTGATTTTTCTCTAATTTTAATACAAAAAGACGATAATCTCGAAGGACAACGAAGCCCATTCCAAACCGGCATCCATGGGAAGCTTGGCCTTTGGGTTGT
TGGTTTCGAGTTTGGTTGATTGATGGATCGGGTTTTTGAGTGGTGTGTGGCTTGGGGTGAAAAGGGTGTGGTCTCAATCCGATCGAGCTTGACGAGGACT
TGGTGTGTGGATGTTTATCGAATTCCGAACCTGATGTTTTTGAGCAGTTGATTTCTTAGTTTGATTCGATGGTGGATTGATTCTTGGATGGCGGATGGGT
TCTAGGATTGGTGCGCTGAATTTGAATTTGAAAGTCGAAGCTGTACCCGATTTGATAAGGAAGGGAAGCAGTGGAAGGAGAGAGGTGGTGGCACTGTGAA
GTTTTTGAAGCATAAGGTGGACTGGGTAGGTGAGGGTTGTCCAAGACCCTAAAGATTTGCGCCAACCATTTAGACTTTCATGGAGAAGTTTCAGGAAGTT
GCGGAATCTGATCAGTCTGCCAAATAGGAGAGTGGAGATAAAGACACATCTGCTGCTGCAGCCAGGCTTCTTGAGAAGCTTGAGTGTTGAGGAGAAGAAA
AATGGAGATGTCTTAACAGAGAAGGAAGCTGAAGAAGCCTCCTCCTGCTGCAAATGAGGAGAGGAAGTCCGGGGAAGAGCCCACAAAATCTGCTGATAAG
TAAAACGAACAAGTGTTCCAAAATTACCAACAAGGTGTTGACCTAGTGGCATTGAGTGTTGCCTAACAACCTTAAGGTCATGGGTTCAAGCCCTGTTGGT
ACCGCATTTACGTTTAGATACGCTGGAGGTGCGCGTGAGCTGGCCCGCAGTGAGTATGAGCGTACACTATCAAGGTAGAGGGGGTGTGCGGCCCCTAGCC
CCCAAGGGGAAGTGGGAAACCACTATCGATCCCCTTAAAAAAAAAAAAATGTTCCAAAATTATAATTGGAAGGAAAAGCTTTGGCGGGCAGCGGACCAGC
TTCTTCGGTATTGATAAGTTAGTCCGTGAGAAACATGTGCGTCAATGGTCTTTTGTGGTCGGGTCGTCGTGTGGCTCATTGGCCATAGTCTTTTGCTGGA
ACTCGGGTCTTGTTTGCATGAACTAGTCTTTGGTTTCCTGACAGGACTTGAGGGTCGGAATCTGTTAAATGTCTGATGATCTTTCTGGGAGGTTTGGATT
GTTACACACTACAAAGTGTCATTTTATTCATACATGAATTTACTTATTTTACTTCTGGTATTTATTGTAGCTGGCTTCACGCAATTTTTGAAGGGTGATC
TTCGCTTCTCGAATTTGCATTGGTGACGAATAGATACTCTGGCGGTTCCTGGTTCAACTATCAGAGGCTCAAGTTGCTGCGAGGCTGTGGATGATTAAAT
TTTTACTGGTTCCAAGAGACATGAAATTCCATCACAGAGCTGAACATTCAACTCAAAGATAAAGAGGACGGGTATAGAAGCGTACACCAAGTTGACATGC
AACCAGATGTGAATCAATCAGGACGGATCATTAATATGATTAACTGAGAAGTAAAAATCCGGTGAAGCAAAGTCAGCCAAAATATATTGAAAGCGCAACT
TCAACATTAAAGTCTCCATCTAGTACAAAAACCGAAGATTAAATTAGCGACACCCAGATGTGAAATTCCGACAACAGACAACCCAGCAGCACTCTCTACT
TGGATCTCTGCCTCATCTTCCGGCGCTTCCTCTTCAGCCTCCTCATCCGCTTCTTCTTCCACTGCGAACTCAGAATCGAAAAACAAATCAAAACCAATTC
GATATACGAATTGCAAAGAAGAATTGCGTGTAAAATTAATACGAAGGAGAAACCTTGGCTCTCATCGCGGCTCAAATGTTTGCCTACAGTTCTTCGGATA
TGGCAGACGAACGGCTGCCGG