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Detailed information on CNT30385588


BLAST search results

BLAST vs Swiss-Prot:
sp|P09315|G3PA_MAIZE, E-value = 4e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676468Triticum turgidumSetaria viridis359.1894.998forward
CNT30524158Triticum turgidumSetaria italica22.58.3695.2463forward
CNT30711851Triticum turgidumGlycine max77.8618.9180.28218forward
CNT30123402Triticum turgidumPhyscomitrium patens206.9794.6456forward
CNT30146657Triticum turgidumMedicago truncatula25.366.4785.9271forward
CNT30215929Triticum turgidumHelianthus annuus87.525.9880.41245forward
CNT30680437Triticum turgidumTriticum urartu93.2150.198.47261forward
CNT30622203Triticum turgidumCajanus cajan40.3613.1282.3113forward
CNT30481607Triticum turgidumChara braunii84.2939.1481.78236forward
CNT30119544Triticum turgidumCitrus clementina28.576.9686.2580forward
CNT30330803Triticum turgidumDioscorea rotundata47.1421.3684.09132forward
CNT30585204Triticum turgidumEchinochloa crusgalli20.3611.2692.9857forward

Expression of CNT30385588

Peptides detected in this lncRNA

>peptide 1 (34 aa)
GTPGSAPRRGCSWRPAPRGRRRTRWGWAPGARSR*

>peptide 2 (80 aa)
NAWFSSSSRVFLETCTTRSTTDTLGVGTRSAIPLSLPLRLGSTSATALAAPVEVGTMLSAAARARRRSRWLASSSLWSPV*

>peptide 3 (92 aa)
ERLVQLLVEGVLGDLHHEVDDGHVGGGHPERDPVELALEVGQHQRHGLGRAGGGGHDVERGGTGTAQVAVARVQQPLVAGVGVGCGHGSLDDA

Sequence

>CNT30385588
GGAACGCCTGGTTCAGCTCCTCGTCGAGGGTGTTCTTGGAGACCTGCACCACGAGGTCGACGACGGACACGTTGGGGGTGGGCACCCGGAGCGCGATCCC
GTTGAGCTTGCCCTTGAGGTTGGGCAGCACCAGCGCCACGGCCTTGGCCGCGCCGGTGGAGGTGGGCACGATGTTGAGCGCGGCGGCACGGGCACGGCGC
AGGTCGCGGTGGCTCGCGTCCAGCAGCCTCTGGTCGCCGGTGTAGGAGTGGGTTGTGGTCATGGTTCCCTTGATGATGCC