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Detailed information on CNT30383518


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672710Triticum turgidumSetaria viridis48.4740.5896.06127forward
CNT30518747Triticum turgidumJuglans regia62.623.6380.49164forward
CNT30372507Triticum turgidumArabidopsis thaliana58.7833.6283.77154forward
CNT30499527Triticum turgidumCoffea canephora54.9630.3886.81144forward
CNT30486603Triticum turgidumOlea europaea74.4333.1183.08195forward
CNT30711461Triticum turgidumGlycine max77.160.381.68202forward
CNT30284964Triticum turgidumTriticum aestivum54.9631.7299.31144forward
CNT30568953Triticum turgidumActinidia chinensis53.4426.9782.14140forward
CNT30135086Triticum turgidumLolium perenne78.2434.7595.12205forward
CNT30610309Triticum turgidumGossypium raimondii74.8130.9181.12196forward
CNT30370320Triticum turgidumOryza glumipatula46.9519.4392.68123forward
CNT30105016Triticum turgidumOryza longistaminata78.2434.8689.27205forward

Expression of CNT30383518

Peptides detected in this lncRNA

>peptide 1 (68 aa)
HFLLSMIFWRPGNLNLARRRHLVDTEHMERVNPDPEVEGILSCMLSHVLVASNTGSLKSLTGHILLLP*

Sequence

>CNT30383518
CCACTTCCTGCTCTCAATGATCTTTTGGCGGCCAGGGAACTTGAACTTGGCACGACGAAGGCATCTTGTTGATACGGAGCACATGGAACGGGTGAACCCT
GACCCTGAGGTGGAAGGCATCCTTTCCTGCATGCTTAGTCATGTACTTGTTGCAAGCAATACGGGCAGCCTCAAGAGCCTCACTGGACACATTCTCCTTC
TCCCATGAGACAAGGTGAACACAGTGAGAGAACTCATCGACACCCTTCTTCTTCATGCCGAC