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Detailed information on CNT30370768


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690196Oryza glumipatulaOryza sativa12.0620.2687.82156reverse complement
CNT30193407Oryza glumipatulaSecale cereale9.6723.4196125forward
CNT30290324Oryza glumipatulaTriticum aestivum14.3146.2594.59185reverse complement
CNT30151885Oryza glumipatulaPrunus persica7.6629.1286.8799forward
CNT30101297Oryza glumipatulaOryza rufipogon14.4628.6498.93187forward

Expression of CNT30370768

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLMNLDIYLSRFINIDMNVRNARMTYIVKRREYLSTVLEPF*

>peptide 2 (85 aa)
MIQPVNGKDTKKTYYIFVLLMGFNNLQLPLKLQVLNLNQLLSIGLLQAMPCLACRNTSNHVKDLIHVLIFLNEHTHPILSCQVCI*

>peptide 3 (36 aa)
MYELHLMIAYYDNRKKIIQVRKRLAIFALEKRHLGI*

>peptide 4 (33 aa)
GPSRTGAKSAEIQNAKIGIRLAIIRNAQKISYS*

Sequence

>CNT30370768
TGGTCCTTCACGAACCGGAGCTAAAAGTGCTGAAATCCAAAATGCTAAAATAGGAATAAGGCTTGCTATTATTAGAAATGCCCAAAAAATATCATATTCG
TGAAGCAGAAACATAAATGTACTCCCATTAATGTGGAATAGGCGGAACTGAATTAGTCAATTCAAGTCAGCATTGTCAATTTATACACTACAATAATAGA
TGAATTTGAGGAAAGATAAGACAACTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATCGATGTTAATGAATCTAGATATA
TATCTATCTAGATTTATTAACATCGATATGAATGTGAGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTACCTATCAACCGTTTTGGAACCAT
TCTAGTTCTAGGATGACAAAGTGAAGACATTTCCCGTTGTTGGTTCTATTTGTTGCTCTGAAAAAATGTATGAATTGCATTTGATGATTGCTTATTATGA
TAACAGGAAAAAAATAATACAAGTGAGGAAAAGACTGGCCATTTTTGCGTTGGAGAAGCGGCATCTAGGTATATAGCAGTGAAGGGGATATGTCAGTTTC
TGGTGTCTTCTGTCAACCGGAAACTCGCCTTTGGTGGTAACATTGTTGATAAGATTAAGACCCAACTGAAAACATTATATGATTCTCATATCATAGTAAA
ATCAAAACTGTGCCTCGCTGCTTCTACTAGATAATAACTTGTCGCTTGTTGTAGATTCCCCAAAGACTCCTGTGTCACACCATAGAATGGAATGGTGTTT
TTTTTTTCTCCTCTCCACCTTGTGCCTAGGAATAACAGCTGACGAGAGTGGTTAATTCGAGTGATCATTGTGTTGAACCAATCAGTTATTATTTGTGTAG
CTGAACCAATAACCACCACAGAATGGTGCAGTTCTTGTAAAGCTAACCTCTGTAAAAAGTAGAACAGAAAACGTATTATCCCATCGATGTATCCCTTGCT
GGTGATGAACTAATGATCCAACCAGTTAATGGAAAAGATACAAAGAAAACGTATTATATTTTTGTACTTCTGATGGGATTCAACAACCTTCAGTTACCAC
TGAAATTGCAAGTCTTAAACCTGAATCAACTATTGTCTATTGGTCTATTGCAAGCCATGCCCTGCCTAGCTTGTAGGAACACAAGCAACCATGTAAAAGA
TCTAATTCATGTTCTTATCTTTTTAAACGAACATACGCATCCAATTTTGTCATGCCAAGTATGTATATGACGCACATCATTGCCATATAATCA