Detailed information on CNT30290324


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193407Triticum aestivumSecale cereale84.2563.1199.41337reverse complement
CNT30396669Triticum aestivumTriticum turgidum60.7558.1399.59243reverse complement
CNT30370768Triticum aestivumOryza glumipatula46.2514.3194.59185reverse complement
CNT30151885Triticum aestivumPrunus persica3541.1884.29140reverse complement
CNT30101297Triticum aestivumOryza rufipogon64.539.5191.86258reverse complement

Expression of CNT30290324

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MFLLHEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPE

Sequence

>CNT30290324
GACAAAGTGAAACGAGAAAGTTTTCTTTATATAAGAATTAGATCTACATACACCATATCTAAATAGAATGGAAATCCAAAAGAAAGGGAGTTGGGATTCC
ATTGGATGAATCTTTAAAGAAGATGCAACACAGAGGAAACAAAGGCTAAACTAAGCGCTTTTGTTTGAACAAAAAAGATTCTTGTTTCACCGAGGAAAAG
AGAGAAGTTCTGGATAAATTGACAATGCTGAATTGAATTGACTAATTTAAGTTCCGCCTATTCCACATTAATGGGAGTACATTATGTTTCTGCTTCACGA
ATATGATATTTTTTGGACATTTCTAATAATAGCAAGCCTTATTCCTATTTTGGCATTTTCGATTTCAGGACTTTTAGCCCCGGTTAGTGAAGGACCAGAG