Detailed information on CNT30151885


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M3L9|NU3C_SPIOL, E-value = 3e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30290324Prunus persicaTriticum aestivum41.183584.29140reverse complement
CNT3082972Prunus persicaBrassica juncea36.476.0890.32124forward
CNT30609384Prunus persicaGossypium raimondii31.7621.6492.59108reverse complement
CNT30370768Prunus persicaOryza glumipatula29.127.6686.8799forward
CNT30101297Prunus persicaOryza rufipogon29.1215.1686.8799forward
CNT30723531Prunus persicaLupinus angustifolius47.066.5686.25160forward

Expression of CNT30151885

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LEIFSGPLLIGAKTPDIRNAKIGITLDTIRNAQKKSYS*

>peptide 2 (31 aa)
MINKKTKENSKPSKFSPPLTYQPYPTQPPVAS

Sequence

>CNT30151885
ACTCGAAATTTTTTCTGGTCCTTTGCTAATCGGGGCTAAAACTCCGGACATTAGAAATGCCAAAATTGGAATAACACTTGATACTATCAGAAATGCCCAG
AAAAAATCATATTCGTAAAGCAGAAACATAGACGTACTCCTATTAATGTGGAAAATATACGGAATTAGTTGATTCGAATTAATTGTAAAATCATCCATAA
CTGTAGTCAAAATAAATAATAAAAAATTATTCAATTAGAAAAATGATAAATAAAAAAACAAAAGAAAATAGCAAACCCAGCAAATTCTCCCCTCCCCTCA
CGTATCAACCATACCCCACCCAGCCCCCAGTCGCCTCCCC