Detailed information on CNT30363908


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222577Sorghum bicolorHordeum vulgare75.16.8487.7187forward
CNT30456894Sorghum bicolorSaccharum spontaneum97.5925.3197.94243forward
CNT305862Sorghum bicolorZea mays79.527.4596.46198forward
CNT3066683Sorghum bicolorLeersia perrieri34.5411.1397.6786forward
CNT30343353Sorghum bicolorEragrostis tef83.9414.7995.22209forward
CNT30594884Sorghum bicolorEragrostis curvula77.5113.3296.89193forward

Expression of CNT30363908

Peptides detected in this lncRNA

>peptide 1 (48 aa)
CRHGCDMAGWKRASFSPLRGGARVELAADSFTHMPSKRPWKRASFADE*

Sequence

>CNT30363908
CTGCCGCCATGGTTGTGATATGGCCGGATGGAAGAGAGCGTCCTTCAGTCCACTCAGGGGCGGTGCTAGGGTCGAATTAGCTGCCGACTCATTCACCCAC
ATGCCAAGCAAACGGCCATGGAAACGAGCTAGCTTTGCAGATGAGTGAATGAAGCGGGAGGTAAAAGCTTCGATCTCGCACCATCTTTGCTTGGACTGAA
GGGTGCTCCCTCCTCCCCTCCTTAATTGTTTACTTTACCCATGGCGCAG