Detailed information on CNT30594884


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30456894Eragrostis curvulaSaccharum spontaneum13.3220.196.89193forward
CNT30343353Eragrostis curvulaEragrostis tef99.1101.6391.571436forward
CNT30363908Eragrostis curvulaSorghum bicolor13.3277.5196.89193forward

Expression of CNT30594884

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MKVQWCALLWARNVNTMLFWLRKSGNGVFHFLQQQDVFRSPCLLWGLACNQ*

>peptide 2 (46 aa)
MHGSKMPGGKRASFSPLRGGVGRISCRLIHPHAKQTAMERASFADE*

>peptide 3 (56 aa)
MHVLICVSLFALSCLIGHAISMHAIKQKSVVFLPPRIPSLFSLRCFLFFFWLLLVH*

>peptide 4 (57 aa)
MYIYLFVSFPCMVVRCPEGRERPSVHSGAVWVELAADSFTHMPSKRPWKELALQMSE*

>peptide 5 (78 aa)
MVSFTSCNSKTSFDLPVCFGAWHATSDSTCASAASYACFWSMSATWTGSSGVPRLFSEVPDIGDCSRLVFFLLRFVIY*

>peptide 6 (39 aa)
MQPVIRRVPLQLAMLAFGACLPLGLDPQVSQGYFLKSPT*

>peptide 7 (29 aa)
MLAEPYSISSKKRIYKFLKRKEKAFALLV*

Sequence

>CNT30594884
ATTGTTTGTGATGTCACAACTTGGTTCTATTTAATGCCTTGCCGTCTACCTTTCTCCTTTGCACCCGTCAAAATCTGCGGCTCTTGACAAGATCCACAGA
GAAGCTCATATGCCATGAGAAGCTCGATCTCCAGCTCTAGTCTTTTTCACCTCCTCTTCTGTTGATGTATGTATATATACTTGTTTGTTAGTTTCCCATG
CATGGTAGTAAGATGCCCGGAGGGAAGAGAGCGTCCTTCAGTCCACTCAGGGGCGGTGTGGGTCGAATTAGCTGCCGACTCATTCACCCACATGCCAAGC
AAACGGCCATGGAAAGAGCTAGCTTTGCAGATGAGTGAATGAAGCGGGAGGTAAAAGCTTCGATCTCGCACCATCGTTGCTTGGACTGAAGGGTGCTCCC
TCCTCCGGGACTTTGGACATGCATCTTCAGGTTCTGGGAGTTGATGGTCTGTATGCTCCTTCCTTCAGTTAACAAATGCATGTCTTGATCTGTGTCTCTT
TATTTGCTTTGAGCTGCTTAATTGGGCATGCTATATCGATGCATGCTATAAAGCAGAAGTCAGTTGTTTTCTTGCCTCCGCGAATTCCCAGTCTATTTTC
CCTCAGGTGCTTCCTGTTCTTCTTTTGGTTACTGTTAGTCCACTAGCTGATTGAGATTTGTACTTTCCTTAACCTGTCTCTTTGGAGTACTAATAAATCC
TTGATATGCTCGCTGAACCTTACTCTATCTCCTCCAAAAAGAGAATATACAAGTTTCTGAAAAGAAAAGAAAAAGCTTTTGCTTTACTTGTGTAGATCTT
GCAGTTTTACACGATCTATTACATGCATCTTCGGTTTAACTTTCTGTGATCTATGATCTAATGAAGGTGCAATGGTGTGCGCTGTTGTGGGCTAGGAATG
TAAACACGATGCTTTTCTGGCTGCGGAAATCTGGAAATGGTGTCTTTCACTTCTTGCAACAGCAAGACGTCTTTCGATCTCCCTGTTTGCTTTGGGGCTT
GGCATGCAACCAGTGATTCGACGTGTGCCTCTGCAGCTAGCTATGCTTGCTTTTGGAGCATGTCTGCCACTTGGACTGGATCCTCAGGTGTCCCAAGGTT
ATTTTCTGAAGTCCCCGACATAGGAGATTGCTCAAGGCTCGTGTTCTTCCTTTTGAGATTTGTGATATACTGAAATTACCTTTGAGATTTGTGATTTTAC
CTGCACAAGGGTTAGTGAAATGTGATCCACTTGTGTTTACGCATCAGCATGTTTTCTCACATGTTCCCCACAACCTTTGGTCTGTCAAAGTATGTGAGCC
GTCAAGTCGGCCTTGATTTTCTGTGATTTCAAAAGGGGTGTCCATTCATTACCATGTAACGAAATTTTCGCCAAGATATATGAAGGGAAATTTGATACTT
TGAATATATATACTGCTTCAGAGTAGATATCTCTATTTGTAAGTGTTAG