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Detailed information on CNT30623259


BLAST search results

BLAST vs Swiss-Prot:
sp|P92919|CB23_APIGR, E-value = 1e-128

BLAST vs NONCODE:
NONBNAT007398, E-value = 9e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30359252Daucus carotaLactuca sativa62.5642.9587.37396forward

Expression of CNT30623259

Peptides detected in this lncRNA

>peptide 1 (36 aa)
METLPFPKSSEEDGATCTAFPAKEGEERAIDAAAIV*

>peptide 2 (40 aa)
MTSPSGPPATRYPSTAPIKITWVAQMARMLCAWTKLGLPK*

Sequence

>CNT30623259
TCCTCCGGGGTAAAGGGGGTCTATGACCTCGCCTAGTGGTCCACCAGCAACGCGGTATCCCTCAACAGCACCCATTAAAATAACTTGGGTAGCCCAGATG
GCCAGGATGCTCTGTGCATGGACCAAGCTTGGGTTGCCTAAGTAGTCAAGCCCGCCTTCACTGAAGATCTGTGAGCCGGCCTTGAACCAGACAGCTTCGC
CAAACTTGACACCATTTCGGGCCAAGAGCTCGGGGAAAACACAGCCAAGAGCACCAAGCATAGCCCATCTGGAGTGGATGACTTCAAGCTCACGGTTCTT
GGCAAAGGTCTCGGGATCAGCAGAAAGTCCTGCTGTGTCCCAGCCATAGTCACCAGGGAATTCACCAGTCAGGTAAGATGGAGCCTCACCAGAGAATGGG
CCCAAGTACTTGACTCTGTCTGGGCCGTACCAGGGGCTGTCAGAGACTGGTGCTTTAACTGTTTTCCTCATGGAAACTCTTCCATTTCCAAAGAGCTCAG
AAGAAGACGGAGCTACTTGCACAGCCTTTCCGGCAAAAGAAGGGGAAGAGAGAGCCATTGATGCAGCAGCCATTGTATAATTGAGCTGGGATGTAAGAGT
GGTATTAGTGGGCTTGAGATGAATGTGTTGTCA