Detailed information on CNT30356894


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 4e-142

BLAST vs NONCODE:
NONMTRT001605, E-value = 7e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709059Lactuca sativaGlycine max45.1976.4884.99413forward
CNT30633439Lactuca sativaCapsicum annuum56.2456.6187.94514forward
CNT30508817Lactuca sativaSolanum lycopersicum56.2451.8186.96514forward
CNT30145117Lactuca sativaMedicago truncatula47.9247.6187.21438forward

Expression of CNT30356894

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MASLPFLSSFTFSSANASGSSARPNGSKLPPG*

>peptide 2 (43 aa)
MPLGHQPDPMGRSYHQGKVGQLPHQEVHQQFCNLQLHPSRSLG*

>peptide 3 (35 aa)
MYYTKLIHKRVPHHSNIISHSNSQNSLSRYKVCSI*

>peptide 4 (78 aa)
MAHLLWMTSSSRYLTRSGPYHGLPDGATFLTAVFLMETLPFPIISEPDGAAFTACPTKEEDRAMVEAAIFVRFILKML*

>peptide 5 (71 aa)
MDQTWVPQVVKTTLTKDLGSSLEPYSLTKLDTITRQEFGEDAPKSSEHGPSAVDDLKLTVLNTVGAVPWTS*

Sequence

>CNT30356894
TTAAAACCTAGTATTAGAAAGGAAAACTAAATTAACACCAATTTGCCCAAAATTAAACCATGTATTATACTAAATTAATTCACAAGAGAGTTCCACATCA
CTCAAATATTATCTCGCACTCAAATTCACAAAACTCACTTTCCAGGTACAAAGTTTGTAGCATATGACCATGCATTGTTTGCAACCGGGTCCGCAAGATG
GTCAGCGAGGTTCTCCAATGGTCCCTTTCCGGTAACAATGGCTTGAACAAAGAATCCAAACATAGAGAACATGGCTAGTCTACCGTTCTTGAGCTCCTTC
ACTTTCAGCTCAGCAAATGCCTCTGGGTCATCAGCCAGACCCAATGGGTCGAAGCTACCACCAGGGTAAAGTGGGTCAACTACCTCACCAAGAGGTCCAC
CAGCAATTCTGTAACCTTCAACTGCACCCATCAAGATCACTTGGGTAGCCCAGATGGCTAAAATGCTTTGTGCATGGATCAAACTTGGGTTCCCCAAGTA
GTCAAGACCACCCTCACTAAAGATCTGGGATCCAGCCTTGAACCATACAGCCTCACCAAACTTGACACCATTACGCGCCAAGAGTTCGGGGAAGACGCAC
CCAAGAGCTCCGAGCATGGCCCATCTGCTGTGGATGACCTCAAGCTCACGGTACTTAACACGGTCGGGGCCGTACCATGGACTTCCTGATGGTGCGACTT
TCTTGACTGCTGTCTTCCTCATGGAAACCCTTCCATTTCCGATTATTTCTGAACCAGATGGTGCTGCTTTCACTGCCTGTCCGACGAAAGAAGAAGATAG
AGCCATGGTGGAAGCTGCCATTTTTGTGAGATTTATTTTGAAGATGTTGTGATGGTTATACTTATGAAGATGGGTAGAACTGGAAGTAGATTTATAGGGT
AGTTTTTGGATCAG