Detailed information on CNT30709059


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 3e-105

BLAST vs NONCODE:
NONMTRT001605, E-value = 9e-67

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504491Glycine maxNicotiana attenuata79.8145.4684.69431forward
CNT30633494Glycine maxCapsicum annuum8047.2686.34432forward
CNT3091201Glycine maxSolanum tuberosum80.5643.8187.13435forward
CNT30508697Glycine maxSolanum lycopersicum80.1946.7686.37433forward
CNT30173250Glycine maxTrifolium pratense82.2238.5182.21444forward
CNT30598305Glycine maxFraxinus excelsior74.8159.1582.18404forward
CNT30623002Glycine maxDaucus carota79.2645.1584.35428forward
CNT30356894Glycine maxLactuca sativa76.4845.1984.99413forward
CNT30723175Glycine maxLupinus angustifolius71.8553.1587.37388forward

Expression of CNT30709059

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MANLPFLSSFTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (90 aa)
VGPGIVVDWVRKVISKVLQWTLTGDNGLNKEPKHREHGQSPVLEFLHLKLSKSLWVISKAQWVKAATRVDWVSDLTEGPTSNTITLNSTH*

Sequence

>CNT30709059
GTAGGCCCAGGCATTGTTGTTGACTGGGTCCGCAAGGTGATCAGCAAGGTTCTCCAATGGACCCTTACCGGTGACAATGGCCTGAACAAAGAACCCAAAC
ATAGAGAACATGGCCAATCTCCCGTTCTTGAGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCAC
CAGGGTAGATTGGGTCAGTGACCTCACCGAGGGGCCCACCAGCAATACGATAACCCTCAACAGCACCCATTAGGATAACTTGGGTGGCCCAGATGGCGAG
GATGCTCTGGGCGTGGACAAGGCTTGGGTTGCCCAAGTAGTCCAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCTTGAACCACACAGCTTCTCCAAAC
TTGACCCCGTTGCGGGACAATAGTTCGGGGAAGACGCAGCCCAAGGATGGGGAAGAGAGAGCCATGGAGGAGGCTGCTGCCATTTTTAAAACTCTAGGAT
GAGCTTGCTTTCTGCCTTGTGTTATGGAGTTGTGAGTGAT