Detailed information on CNT30345514


BLAST search results

BLAST vs Swiss-Prot:
sp|P09755|CB22_SOYBN, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30250509Eragrostis tefAvena sativa62.348.6491.12304forward
CNT3013355Eragrostis tefZea mays61.8945.9795.36302forward
CNT30369866Eragrostis tefOryza glumipatula63.9342.4587.5312forward
CNT30498680Eragrostis tefDigitaria exilis63.3242.3387.7309forward
CNT30116841Eragrostis tefOryza nivara59.6339.4886.6291forward
CNT30603824Eragrostis tefOryza punctata63.5250.4187.42310forward

Expression of CNT30345514

Peptides detected in this lncRNA

>peptide 1 (74 aa)
FIESFIRPIQNMSTNTHYWYNLPSACSILQYSYTHRYNSTYEYVRRLRYTRHPSFTLLLTCRGRSWWRRTMRCC*

Sequence

>CNT30345514
ATTTATTGAGTCATTCATCAGGCCCATCCAGAACATGAGCACAAATACACACTACTGGTACAATCTCCCATCGGCGTGCTCCATTTTACAGTACTCGTAC
ACCCACAGGTACAATAGTACATACGAATACGTACGTCGACTACGGTACACACGACATCCCAGCTTCACCTTGCTGCTCACTTGCCGGGGACGAAGTTGGT
GGCGTAGGACCATGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCGAGCGGGCCCTTGCCGGTGACGATGGCCTGCACAAAGAAGCCG
AACATGGAGAACATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGACCCGGCCTTGA
ACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCCAGCAGCTCGGGGAAGACGCAGCCCAGCGCGCCCAGCATGGCCCACCGGCA