« Back to Dioscorea rotundata search


Detailed information on CNT30330868


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 2e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616396Dioscorea rotundataSesamum indicum71.5693.7379.92478forward
CNT30267777Dioscorea rotundataChenopodium quinoa53.2987.979.21356forward
CNT30403407Dioscorea rotundataBeta vulgaris42.9671.0482.23287forward
CNT30559586Dioscorea rotundataActinidia chinensis21.4117.7287.41143forward
CNT30591824Dioscorea rotundataMusa acuminata37.2863.0481.93249forward

Expression of CNT30330868

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLGYNQERLDCIPERMGCIQEMMDCILGMRWERSPSHQHMEKTEHL*

Sequence

>CNT30330868
TGGGACTGTAAGGACTAGAAGGAGATATCCTTGGACTGCTAGGAGAGTATGCAATTGAAGGGCTGTATTTAGCTGAAGGAGGATTGTAACTTGGAGATGT
AGGGCTATAACTGGGAGATGTGGGGCTGTAGCTGGGTGATGTGGGACTATACCCAGGAGAGGTAGGACTGTAGGCAGGCGATGTAGGGCTATAAGAAGGC
GAGGTCGGGCTGTATGATGGTGAGGTTGGGCTATACACCGGGGATGTGGGACTGTAAACTGGGGAAGTAGGACTGTAGCTAGGTGAAGTTGGGGAGTAAG
ATGGGCTGGTTGGAGAATAGGCAGGACTTGTTGGACTATAACCAGGAGAGCTAGGACTGTATGTTGGCGATGTAGGACTGTAGCCAGGTGATGTAGGACT
GTATCCAGGGGATGTTGGGCTATAACCAGGAGAGGTTGGACTGTATCCCGGAGAGGATGGGCTGTATCCAGGAGATGATGGACTGTATCCTGGGGATGAG
GTGGGAGAGAAGCCCATCCCACCAACATATGGAGAAAACTGAGCATCTGTAATGGGTGAAGAGCGAGCATTTGGACTAAGGAGATAGCTGGGAGACATCA
TTCCCTCATGATATGGCGTCCCTGAGACAGGTGAACGAGATGGTGTCATGCCAAAGTCCAATCCCTCC