Detailed information on CNT30616396


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 5e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523577Sesamum indicumSetaria italica42.3534.8980.09216forward
CNT30379091Sesamum indicumManihot esculenta58.4350.5181.21298forward
CNT30489004Sesamum indicumOlea europaea56.2746.7485.71287forward
CNT30648253Sesamum indicumRosa chinensis35.6927.2985.16182forward
CNT30330868Sesamum indicumDioscorea rotundata93.7371.5679.92478forward
CNT30497803Sesamum indicumDigitaria exilis50.235.6179.69256forward

Expression of CNT30616396

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MQDLLGYIQVNWDYMLGKWGYNQGKWGCNQEKWGYNQEMMGCIQERTGCNLEMM*

Sequence

>CNT30616396
CTGTAACTTGGAGAGGACGGACTGTAAGGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGT
AACTTGGAGATGTAGGGCTATAACTTGGTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATAACCAGGGGAGGTCGGGCTGTAGGCAGGGGAGGTTGG
GCTATAGCTCGGAGATGTCGGACTGTAACTTGGAGATGTAGGACTATAACTTGGTGAAGTCGGACTATAGCTAGGAGAAGTTGGGCTGTAGGTTGGAGAA
GTAGGTGAGTAGGATGGGCTAGTTGGAGAATATGCAGGACTTGTTGGGCTATATCCAGGTGAACTGGGACTATATGTTGGGGAAGTGGGGCTATAACCAG
GGGAAGTGGGGCTGTAACCAGGAGAAGTGGGGCTATAACCAGGAGATGATGGGCTGTATCCAGGAGAGGACGGGCTGTAACCTGGAGATGATGTAGGAGA
GAAGGCCATT