Detailed information on CNT30591824


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403782Musa acuminataBeta vulgaris93.9288.7681.13371forward
CNT30710529Musa acuminataGlycine max88.6162.0680.57350forward
CNT30559586Musa acuminataActinidia chinensis68.3533.4681.85270forward
CNT30311670Musa acuminataCamelina sativa70.3850.4581.29278forward
CNT30263629Musa acuminataBrassica rapa54.4337.5281.4215forward
CNT30216752Musa acuminataKalanchoe fedtschenkoi54.9446.8780.18217forward
CNT30355218Musa acuminataLactuca sativa68.3539.7681.48270forward
CNT30574226Musa acuminataVitis vinifera81.0164.1381.25320forward
CNT3023412Musa acuminataPopulus trichocarpa53.6737.5281.13212forward
CNT30330868Musa acuminataDioscorea rotundata63.0437.2881.93249forward
CNT30150023Musa acuminataBrachypodium distachyon24.0512.6785.2695forward

Expression of CNT30591824

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLDCIPEKLGYRQVMSDYRKVMLDYRMVRLGCRQEMLDCRLGKSDCKLEK*

>peptide 2 (44 aa)
NLEMIDRMDWMVTALDCLENKQAKDCTLLRQDCNLEMWGYNLGM*

Sequence

>CNT30591824
TAATTTGGAGATGATTGACCGTATGGACTGGATGGTGACAGCCTTGGACTGCTTGGAGAATAAGCAAGCGAAGGACTGTACTTTGCTGAGGCAGGATTGT
AACTTGGAGATGTGGGGCTATAACTTGGGGATGTAGGACTATAGCTAGGAGATGTTGGACTGTATCCCGGAGAAGTTGGGCTATAGGCAGGTGATGTCGG
ACTATAGGAAGGTGATGTTGGACTATAGGATGGTGAGGTTGGGCTGTAGGCAGGAGATGTTGGACTGTAGGCTGGGGAAGTCGGACTGTAAACTGGAGAA
GTAGGGCTGTAGCTTGGCGAAGTAGGACTGTAACTGGGGGAAGTTGGGCTGTAACTGGGGGAAGTAGGACTATAAGTAGGAGATGTAGGGCTATA