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Detailed information on CNT30267777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 7e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379142Chenopodium quinoaManihot esculenta44.9419.4981.87182forward
CNT30508953Chenopodium quinoaSolanum lycopersicum56.0596.681.5227forward
CNT30330868Chenopodium quinoaDioscorea rotundata87.953.2979.21356forward

Expression of CNT30267777

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVIFLGCLESMPVMDCIWLKGYSLEKLDYN*

>peptide 2 (44 aa)
MWGYSLVRWESKMGLWVNMPGLLDYSQETQDCKSGKLDYIQERLD

Sequence

>CNT30267777
TTTGGGAGGTAGGGCTGTAGGGACTGGATGGTGATATTCTTGGGCTGCTTGGAGAGTATGCCAGTGATGGACTGTATTTGGCTGAAGGGTTATAGCTTGG
AGAAGTTGGACTATAACTAGGTGATGTAGGGCTATAACTTGGTGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGGCTGTAC
GATGGAGAAGTAGGGCTGTATGATGGAGATGTGGGGCTGTAGCTTGGAGAGGTGGGGCTGTAGCTAGGAGATGTGGGGCTATAGCTTGGTGAGGTGGGAG
AGTAAGATGGGCTTGTGGGTGAATATGCCGGGCTTGTTGGACTATAGCCAGGAGACCCAGGACTGTAAGTCGGGGAAGTTGGACTATATCCAGGAGAGGT
TGGAC