« Back to Asparagus officinalis search


Detailed information on CNT30318989


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616204Asparagus officinalisSesamum indicum21.2816.7992.8670forward
CNT3069056Asparagus officinalisQuercus suber24.627.6688.8981forward
CNT30572433Asparagus officinalisVitis vinifera22.4913.4386.4974reverse complement
CNT30704539Asparagus officinalisPrunus avium21.586.6288.7371reverse complement

Expression of CNT30318989

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MRVGRAKAGLTRFLKGRAPRQAGFTEQRKPPALSGGRITGCCAVHPQ*

Sequence

>CNT30318989
AGCGTGGGCTTGTAACCAAGCGGGGCATTAAGTGGTCGTGAACCGTGGGCTTGTAACCAAGCGGGGCATTAAGTGGTCGTGAACGTTGGGCCTTGTAACT
GGACCTGGTTGTGCAGCACTCTCTGCTGGCCCGCCCGTTCCAAGTTGGGCAGTGATGCGTGTGGGCCGAGCGAAGGCTGGGCTCACTCGTTTCTTGAAGG
GCAGGGCACCGCGTCAGGCTGGCTTCACAGAGCAGCGAAAACCTCCCGCTCTCAGCGGTGGAAGGATCACGGGCTGCTGTGCTGTGCATCCGCAATAGAC
CCAGTTACAGTCCACCAACGAACCCACCT