Detailed information on CNT30616204


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Sesamum indicumArabidopsis thaliana18.7126.0988.4678reverse complement
CNT30382472Sesamum indicumManihot esculenta17.5123.9389.0473forward
CNT3092489Sesamum indicumSolanum tuberosum21.3429.9785.3989forward
CNT30561829Sesamum indicumActinidia chinensis17.9921.0190.6775forward
CNT30172422Sesamum indicumTrifolium pratense18.7124.6885.978forward
CNT3076575Sesamum indicumBrassica juncea18.9425.1687.3479forward
CNT30262096Sesamum indicumBrassica rapa18.9427.0588.6179forward
CNT30612154Sesamum indicumArabis alpina17.5124.0189.0473reverse complement
CNT30623923Sesamum indicumDaucus carota19.1826.3288.7580forward
CNT30704539Sesamum indicumPrunus avium20.628.0288.3786reverse complement
CNT30644641Sesamum indicumCannabis sativa20.8623.3988.5187forward
CNT30318989Sesamum indicumAsparagus officinalis16.7921.2892.8670forward
CNT30120361Sesamum indicumCitrus clementina24.2233.3387.13101reverse complement

Expression of CNT30616204

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MAFRVEGTASGWFHRAATTSRSLRWKDHGSVLLGSSLATWVSPNWTITVFYL*

>peptide 2 (90 aa)
SPSLVTEACDPSGGFMVIGRWAEIGCWIQVANLLVRPFQAGRLGLGLQAKAWASWPLEWRVPRQAGFTEQRPPPALCGGRITDRCCLDPV*

Sequence

>CNT30616204
CATCGCCGAGCCTTGTAACGGAGGCTTGTGACCCAAGTGGGGGCTTTATGGTGATTGGACGTTGGGCTGAAATAGGTTGTTGGATCCAAGTTGCTAACTT
GCTGGTCCGCCCGTTCCAAGCGGGGAGGTTGGGTCTCGGACTCCAGGCGAAAGCTTGGGCTTCATGGCCTTTAGAGTGGAGGGTACCGCGTCAGGCTGGT
TTCACAGAGCAGCGACCACCTCCCGCTCTCTGCGGTGGAAGGATCACGGATCGGTGCTGCTTGGATCCAGTTTAGCAACTTGGGTCAGCCCTAATTGGAC
AATCACTGTTTTTTATCTCTGATTGGGCACAAATAATGGTCTCGCTGGGTCGGATTCAGATGGATGATCTATGCCAAATGCACTGGAAGTCTACTATAGA
AGTGAAGTCCTTTATAG