Detailed information on CNT30316100


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 1e-178

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702989Corylus avellanaQuercus lobata71.4770.5881.45674forward
CNT30310534Corylus avellanaCamelina sativa71.0556.5982.54670forward
CNT30217700Corylus avellanaKalanchoe fedtschenkoi41.3649.4386.92390forward
CNT30714756Corylus avellanaMalus domestica golden57.055386.25538forward
CNT3055180Corylus avellanaAmborella trichopoda63.4157.8982.11598forward

Expression of CNT30316100

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGQSFHLGRWGPSPHRVAHRQYGNPQQHPSR*

>peptide 2 (29 aa)
MAHLEWMTSSSRFFAKVSGSAESPAVSQP*

>peptide 3 (51 aa)
MGCRRKPAWSLFSSWRHVQHRAPELTEQPALPCRQMMGKREPLLKQPLRLE*

>peptide 4 (48 aa)
METRPTPSSGVDGATCTALPANDGEERAIVEAAIEVRIEKETAMQGKE*

>peptide 5 (72 aa)
QRFRGEVLQVIHILCNFEEKSFTGSQYLRLTFRGRSLWRKPRHCCLLGRQGGQRGSPMAPFQSQWPEQRTQT*

Sequence

>CNT30316100
TCAGAGATTCAGAGGAGAAGTACTACAGGTAATTCACATTTTGTGCAATTTTGAGGAGAAAAGCTTCACGGGGTCTCAATATCTCCGGCTCACTTTCCGG
GGACGAAGTTTGTGGCGTAAGCCCAGGCATTGTTGTTTACTGGGTCGGCAAGGTGGTCAGCGAGGTTCTCCAATGGCCCCTTTCCAGTCACAATGGCCTG
AACAAAGAACCCAAACATAGAGAACATAGCCAATCTTCCATTCTTGAGCTCCTTCACCTTAAGCTCAGCAAAAGCTTCCGGGTCATCAGCAAGACCCAAT
GGGTCAAAGCTTCCACCTGGGTAGATGGGGTCCGTCACCTCACCGAGTGGCCCACCGGCAATACGGTAACCCTCAACAGCACCCATCAAGATGACCTGAG
TTGCCCAGATGGCCAGAATGCTTTGCGCGTGGACCAAGCTCGGGTTGCCCAAGTAGTCAAGACCGCCTTCGCTGAAGATCTGAGCTCCGGCCTTGAACCA
CACGGCCTCGCCGAACTTGACGCCGTTCCGGGACAAGAGCTCCGGGAAGACGCACCCGAGGGCTCCAAGCATGGCCCATCTGGAGTGGATGACTTCCAGC
TCACGGTTCTTTGCAAAGGTCTCTGGGTCGGCAGAAAGCCCTGCAGTGTCCCAGCCATAGTCACCGGGGAATTCTCCAGTAAGGTAAGATGGGGGCTCAC
CGGAGAATGGTCCCAAGTACTTGACACGGTCGGGGCCGTACCATGGGCTGCCGGAGGAAGCCCGCCTGGAGCCTGTTTTCCTCATGGAGACACGTCCAAC
ACCGAGCTCCGGAGTTGACGGAGCAACCTGCACTGCCTTGCCGGCAAATGATGGGGAAGAGAGAGCCATTGTTGAAGCAGCCATTGAGGTTAGAATAGAG
AAAGAGACAGCAATGCAAGGGAAGGAGTGATCGATGGGTGTTT