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Detailed information on CNT30714756


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 6e-124

BLAST vs NONCODE:
NONBNAT007398, E-value = 5e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534338Malus domestica goldenEucalyptus grandis52.7147.4784.67535forward
CNT30316100Malus domestica goldenCorylus avellana5357.0586.25538forward
CNT30373848Malus domestica goldenArabidopsis thaliana53.351.6781.52541forward
CNT30500907Malus domestica goldenCoffea canephora46.750.6486.71474forward
CNT30616124Malus domestica goldenSesamum indicum51.6345.9287.98524forward
CNT30728214Malus domestica goldenCorchorus capsularis34.7841.9285.55353forward
CNT30525395Malus domestica goldenPhaseolus vulgaris52.9152.782.87537forward
CNT30629263Malus domestica goldenVigna unguiculata45.7145.0985.99464forward
CNT30504491Malus domestica goldenNicotiana attenuata52.9156.6584.17537forward
CNT30709901Malus domestica goldenGlycine max46.0151.7784.8467forward
CNT3046618Malus domestica goldenPrunus dulcis5364.3583.27538forward
CNT30633439Malus domestica goldenCapsicum annuum51.9258.0485.2527forward
CNT3091168Malus domestica goldenSolanum tuberosum52.2264.0986.04530forward
CNT30562273Malus domestica goldenActinidia chinensis52.4153.6884.4532forward
CNT3088186Malus domestica goldenVigna radiata5349.3685.5538forward
CNT30508703Malus domestica goldenSolanum lycopersicum51.6355.3385.69524forward
CNT30145117Malus domestica goldenMedicago truncatula46.1150.8783.33468forward
CNT30313626Malus domestica goldenCamelina sativa53.146.7581.26539forward
CNT3078262Malus domestica goldenBrassica juncea52.6177.6282.58534forward
CNT30598305Malus domestica goldenFraxinus excelsior42.6663.484.3433forward
CNT30609649Malus domestica goldenGossypium raimondii51.3368.8284.26521forward
CNT30202642Malus domestica goldenHelianthus annuus43.0578.4682.38437forward
CNT30623366Malus domestica goldenDaucus carota5351.6885.13538forward
CNT30621493Malus domestica goldenCajanus cajan52.9140.0183.43537forward
CNT30357114Malus domestica goldenLactuca sativa51.1356.7884.2519forward
CNT30153357Malus domestica goldenPrunus persica5330.4682.34538forward
CNT30705057Malus domestica goldenPrunus avium42.7652.4884.56434forward
CNT3055180Malus domestica goldenAmborella trichopoda46.545.6983.47472forward
CNT30119285Malus domestica goldenCitrus clementina5360.1885.69538forward
CNT30176337Malus domestica goldenVigna angularis25.5225.5488.03259forward
CNT30337332Malus domestica goldenCynara cardunculus52.1240.0585.26529forward
CNT30725370Malus domestica goldenLupinus angustifolius5350.8584.76538forward

Expression of CNT30714756

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MDQARVSQVVETALAEDLGSGLEPHSLAELDTVAGQELGENASKSSEHGPSGVDHFELTVLGEGLWSPGNSPLR*

>peptide 2 (47 aa)
MDTLPFPKSSVAPGESCTALPAKVGEERAMEAAIAKLILIQVEGKNS*

>peptide 3 (43 aa)
MAWTKNPNMENMANLPFLSSFTLSSAKASGSSARPKGSKLPPG*

Sequence

>CNT30714756
GTTGTAGTTATGCCTAAATTGAATCGAGGTTTTTTGAAATAAAAAAATCCAGTTTGGAGGAAAGATTTTAGGTGGATCTGAACCATGTAACCTCTTAATT
TCAGACACATATTGTAGCACATAGTTCAAATTATTGTTGTCCAATACTTGGTACCAAATTTACATCACCGACAACAATACAAACGAAAGTACAAGACAAC
TCCTGAGCTCTCACTTTCCGGGAACAAAGTTTGTGGCGTAGTTCCAGGCATTGTTGGCGACTGGGTCAGCGAGGTGGTCGGCAAGGTTCTCCAATGGTCC
CTTTCCGGTGACGATGGCCTGGACAAAGAATCCGAACATGGAGAACATGGCCAACCTTCCATTCTTGAGCTCCTTCACCTTGAGCTCGGCAAAGGCTTCT
GGGTCGTCAGCAAGGCCCAAGGGGTCGAAGCTTCCGCCGGGGTAAAGGGGGTCGGTCACCTCTCCGAGGGGTCCGCCGGCAATTCTGTATCCCTCAACTG
CTCCCATCAACACAACTTGGGTAGCCCAGATGGCCAAGATGCTCTGTGCATGGACCAAGCTAGGGTTTCCCAGGTAGTCGAGACCGCCCTCGCTGAAGAT
CTGGGCTCCGGCCTTGAACCACACAGCCTCGCCGAACTTGACACCGTTGCGGGACAAGAGCTCGGGGAAAACGCATCCAAGAGCTCCGAGCATGGCCCAT
CTGGAGTGGATCACTTCGAGCTCACGGTTCTTGGCGAAGGTCTCTGGTCACCGGGGAACTCGCCCTTGAGGTAGCTTGGGGGCTCACCGGAGAATGGGCC
TAAGTACTTGACTCTGTCAGGGCCATACCAAGGGCTGCCAGAGGAAACTTGTTTGGTAGCAGTTTTCCTCATGGACACTCTTCCGTTTCCGAAAAGCTCG
GTGGCTCCCGGGGAAAGTTGCACGGCTTTGCCGGCGAAGGTTGGGGAAGAGAGAGCCATGGAAGCAGCCATTGCAAAACTAATTTTGATACAAGTAGAAG
GAAAAAACAGTTGAG